RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 TGM1P22735 817 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 ADSSP30520 456 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 GRIK1P39086 918 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 PSMC1P62191 440 aaKnown RBP10.61□□□□□ -0.71
ACTN1-208ENST00000553370 FAM160A1Q05DH4 1040 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 KCNA1Q09470 495 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 ZNF268Q14587 947 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-208ENST00000553370 STK38Q15208 465 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 SF3A2Q15428 464 aaKnown RBP10.61□□□□□ -0.71
ACTN1-208ENST00000553370 SURF1Q15526 300 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 MAPRE1Q15691 268 aaKnown RBP10.61□□□□□ -0.71
ACTN1-208ENST00000553370 FBXO43Q4G163 708 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 TMEM196Q5HYL7 178 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 SWT1Q5T5J6 900 aaKnown RBP10.61□□□□□ -0.71
ACTN1-208ENST00000553370 LMBRD2Q68DH5 695 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-208ENST00000553370 CRELD2Q6UXH1 353 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-208ENST00000553370 KBTBD6Q86V97 674 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 GPD1LQ8N335 351 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 TOP6BLQ8N6T0 577 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 PDILTQ8N807 584 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 CD101Q93033 1021 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 HPDLQ96IR7 371 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 FAM83CQ9BQN1 747 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 SYT15Q9BQS2 421 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 CBWD1Q9BRT8 395 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 LRRC27Q9C0I9 530 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 SNX25Q9H3E2 840 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 PDE11AQ9HCR9 933 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 OLFML3Q9NRN5 406 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 EHD2Q9NZN4 543 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 MAGEC2Q9UBF1 373 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-208ENST00000553370 FBXO2Q9UK22 296 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-208ENST00000553370 GTF3C4Q9UKN8 822 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 PCDHGC3Q9UN70 934 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 SRPRBQ9Y5M8 271 aaKnown RBP10.61□□□□□ -0.71
ACTN1-208ENST00000553370 WNT6Q9Y6F9 365 aa10.61□□□□□ -0.71
ACTN1-208ENST00000553370 ADAMTS9Q9P2N4 1935 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 ZNF233A6NK53 670 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 SOBPA7XYQ1 873 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 TRDMT1O14717 391 aaKnown RBP10.6□□□□□ -0.71
ACTN1-208ENST00000553370 KIAA0391O15091 583 aaKnown RBP10.6□□□□□ -0.71
ACTN1-208ENST00000553370 NOL4O94818 638 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 RHOBTB1O94844 696 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 EPN2O95208 641 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 APBB3O95704 486 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 HOXA6P31267 233 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 MPLP40238 635 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 CASP5P51878 434 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 DGKEP52429 567 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 SEC13P55735 322 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 TNNC1P63316 161 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 ASIC1P78348 528 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 GUCA2AQ02747 115 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 CREB5Q02930 508 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 IFRD2Q12894 506 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-208ENST00000553370 ST3GAL2Q16842 350 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 WDR44Q5JSH3 913 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 PKN3Q6P5Z2 889 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 HS2ST1Q7LGA3 356 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 TMEM150AQ86TG1 271 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 ARL14EPQ8N8R7 260 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-208ENST00000553370 TSTD1Q8NFU3 115 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 SPATA18Q8TC71 538 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 SH3RF2Q8TEC5 729 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 OSCP1Q8WVF1 389 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 TSC1Q92574 1164 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 MYLPFQ96A32 169 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 CHFRQ96EP1 664 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 TRMT2BQ96GJ1 504 aaKnown RBP10.6□□□□□ -0.71
ACTN1-208ENST00000553370 FUBP3Q96I24 572 aaKnown RBP eCLIP10.6□□□□□ -0.71
ACTN1-208ENST00000553370 LOXL4Q96JB6 756 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 FAM84AQ96KN4 292 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 FNBP1Q96RU3 617 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 ECT2Q9H8V3 914 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 TRPM5Q9NZQ8 1165 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 FAM208BQ5VWN6 2430 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 PLXND1Q9Y4D7 1925 aa10.6□□□□□ -0.71
ACTN1-208ENST00000553370 CCDC163A0A0D9SF12 145 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 AKAP3O75969 853 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 PDGFRBP09619 1106 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 DLATP10515 647 aaKnown RBP10.59□□□□□ -0.71
ACTN1-208ENST00000553370 HDCP19113 662 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 TNNI1P19237 187 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 BDNFP23560 247 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 GJA4P35212 333 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 GALK1P51570 392 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 USP4Q13107 963 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 DMC1Q14565 340 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 ZNF77Q15935 545 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 DUOXA2Q1HG44 320 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 CFAP221Q4G0U5 840 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 RNF43Q68DV7 783 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 OSTM1Q86WC4 334 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 CAMKK1Q8N5S9 505 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 ZSWIM2Q8NEG5 633 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 DNAJC19Q96DA6 116 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 CYP2S1Q96SQ9 504 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 VPS45Q9NRW7 570 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 GDAP2Q9NXN4 497 aa10.59□□□□□ -0.71
ACTN1-208ENST00000553370 BCCIPQ9P287 314 aaKnown RBP eCLIP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms