RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 CXorf57Q6NSI4 855 aaKnown RBP5.88□□□□□ -1.47
ATXN3-217ENST00000553287 DTX2Q86UW9 622 aa5.88□□□□□ -1.47
ATXN3-217ENST00000553287 ATRIPQ8WXE1 791 aa5.88□□□□□ -1.47
ATXN3-217ENST00000553287 SERHLQ9NQF3 203 aa5.88□□□□□ -1.47
ATXN3-217ENST00000553287 ADARB2Q9NS39 739 aaKnown RBP5.88□□□□□ -1.47
ATXN3-217ENST00000553287 SERTAD4Q9NUC0 356 aa5.88□□□□□ -1.47
ATXN3-217ENST00000553287 TNRQ92752 1358 aa5.88□□□□□ -1.47
ATXN3-217ENST00000553287 RNF17Q9BXT8 1623 aaKnown RBP5.88□□□□□ -1.47
ATXN3-217ENST00000553287 IQGAP1P46940 1657 aa5.88□□□□□ -1.47
ATXN3-217ENST00000553287 A0A1W2PPL8 197 aa5.87□□□□□ -1.47
ATXN3-217ENST00000553287 TUSC2O75896 110 aa5.87□□□□□ -1.47
ATXN3-217ENST00000553287 FAM163BP0C2L3 166 aa5.87□□□□□ -1.47
ATXN3-217ENST00000553287 ZNF37AP17032 561 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-217ENST00000553287 ALDH9A1P49189 494 aa5.87□□□□□ -1.47
ATXN3-217ENST00000553287 GPSM2P81274 684 aa5.87□□□□□ -1.47
ATXN3-217ENST00000553287 NHLH1Q02575 133 aa5.87□□□□□ -1.47
ATXN3-217ENST00000553287 PPP2R5AQ15172 486 aa5.87□□□□□ -1.47
ATXN3-217ENST00000553287 NFE2Q16621 373 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-217ENST00000553287 ANO6Q4KMQ2 910 aa5.87□□□□□ -1.47
ATXN3-217ENST00000553287 ARHGAP40Q5TG30 622 aa5.87□□□□□ -1.47
ATXN3-217ENST00000553287 NPNTQ6UXI9 565 aa5.87□□□□□ -1.47
ATXN3-217ENST00000553287 ARHGEF3Q9NR81 526 aa5.87□□□□□ -1.47
ATXN3-217ENST00000553287 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-217ENST00000553287 SERTAD3Q9UJW9 196 aa5.87□□□□□ -1.47
ATXN3-217ENST00000553287 EID1Q9Y6B2 187 aa5.87□□□□□ -1.47
ATXN3-217ENST00000553287 GPATCH8Q9UKJ3 1502 aaKnown RBP5.86□□□□□ -1.47
ATXN3-217ENST00000553287 FMN1Q68DA7 1419 aa5.86□□□□□ -1.47
ATXN3-217ENST00000553287 GCOM1H8Y6P7 765 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-217ENST00000553287 PRPF3O43395 683 aaKnown RBP5.86□□□□□ -1.47
ATXN3-217ENST00000553287 KITP10721 976 aa5.86□□□□□ -1.47
ATXN3-217ENST00000553287 ITPKBP27987 946 aa5.86□□□□□ -1.47
ATXN3-217ENST00000553287 VIPR2P41587 438 aa5.86□□□□□ -1.47
ATXN3-217ENST00000553287 SLC11A2P49281 568 aa5.86□□□□□ -1.47
ATXN3-217ENST00000553287 CCT8P50990 548 aa5.86□□□□□ -1.47
ATXN3-217ENST00000553287 AGFG1P52594 562 aaKnown RBP5.86□□□□□ -1.47
ATXN3-217ENST00000553287 LOXL3P58215 753 aa5.86□□□□□ -1.47
ATXN3-217ENST00000553287 SP2Q02086 613 aa5.86□□□□□ -1.47
ATXN3-217ENST00000553287 E2F2Q14209 437 aa5.86□□□□□ -1.47
ATXN3-217ENST00000553287 MINDY4Q4G0A6 757 aa5.86□□□□□ -1.47
ATXN3-217ENST00000553287 FAM102BQ5T8I3 360 aa5.86□□□□□ -1.47
ATXN3-217ENST00000553287 OVCH2Q7RTZ1 564 aa5.86□□□□□ -1.47
ATXN3-217ENST00000553287 ZNF551Q7Z340 670 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-217ENST00000553287 SLC15A4Q8N697 577 aa5.86□□□□□ -1.47
ATXN3-217ENST00000553287 DNAJC5GQ8N7S2 189 aa5.86□□□□□ -1.47
ATXN3-217ENST00000553287 ZMAT3Q9HA38 289 aaKnown RBP5.86□□□□□ -1.47
ATXN3-217ENST00000553287 TCEAL9Q9UHQ7 104 aa5.86□□□□□ -1.47
ATXN3-217ENST00000553287 SSX2IPQ9Y2D8 614 aa5.86□□□□□ -1.47
ATXN3-217ENST00000553287 CFAP65Q6ZU64 1925 aaKnown RBP5.86□□□□□ -1.47
ATXN3-217ENST00000553287 ADGBQ8N7X0 1667 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 ROBO1Q9Y6N7 1651 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 UGGT1Q9NYU2 1555 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 hCG_1984214I3L0E3 225 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 BTN3A1O00481 513 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 KIF3BO15066 747 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 SLC16A3O15427 465 aaKnown RBP5.85□□□□□ -1.47
ATXN3-217ENST00000553287 TLR5O60602 858 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 EBLN1P0CF75 366 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 CYP2C9P11712 490 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 NPR1P16066 1061 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 NDUFB7P17568 137 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 ARFIP2P53365 341 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 CTBP1Q13363 440 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 ZNF618Q5T7W0 954 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 ZNF783Q6ZMS7 281 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 AMIGO2Q86SJ2 522 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 COL23A1Q86Y22 540 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-217ENST00000553287 KBTBD7Q8WVZ9 684 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 JDP2Q8WYK2 163 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 VOPP1Q96AW1 172 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 SARAFQ96BY9 339 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 RUNDC1Q96C34 613 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 ADAM21Q9UKJ8 722 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 NDRG4Q9ULP0 352 aaKnown RBP5.85□□□□□ -1.47
ATXN3-217ENST00000553287 G3BP2Q9UN86 482 aaKnown RBP5.85□□□□□ -1.47
ATXN3-217ENST00000553287 SHOC2Q9UQ13 582 aa5.85□□□□□ -1.47
ATXN3-217ENST00000553287 MRPS17Q9Y2R5 130 aaKnown RBP5.85□□□□□ -1.47
ATXN3-217ENST00000553287 ZC3H13Q5T200 1668 aaKnown RBP5.85□□□□□ -1.47
ATXN3-217ENST00000553287 PHGDHO43175 533 aaKnown RBP5.84□□□□□ -1.47
ATXN3-217ENST00000553287 TBC1D4O60343 1298 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 NXPH3O95157 252 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 SCGB1D2O95969 90 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 XRCC6P12956 609 aaKnown RBP eCLIP5.84□□□□□ -1.47
ATXN3-217ENST00000553287 JUPP14923 745 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 PPIFP30405 207 aaKnown RBP5.84□□□□□ -1.47
ATXN3-217ENST00000553287 LIPAP38571 399 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 SATB1Q01826 763 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 LLGL1Q15334 1064 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 ARHGAP29Q52LW3 1261 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 COLEC12Q5KU26 742 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 TREML2Q5T2D2 321 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 TEDDM1Q5T9Z0 273 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 LMBRD2Q68DH5 695 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-217ENST00000553287 RGS7BPQ6MZT1 257 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-217ENST00000553287 ZNF788Q6ZQV5 615 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 MAVSQ7Z434 540 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 ZNF280BQ86YH2 543 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 OR6B3Q8NGW1 331 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 B3GNT5Q9BYG0 378 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 TRIM54Q9BYV2 358 aa5.84□□□□□ -1.47
ATXN3-217ENST00000553287 TMEM60Q9H2L4 133 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms