RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 IFNAR2P48551 515 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 PDE6CP51160 858 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 MYO1EQ12965 1108 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 NR1H3Q13133 447 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 DMC1Q14565 340 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 ELF2Q15723 593 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 VSTM1Q6UX27 236 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 C4orf50Q6ZRC1 276 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 SYCP3Q8IZU3 236 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 ARL14EPQ8N8R7 260 aaPredicted RBP12.67□□□□□ -0.38
CKAP4-202ENST00000552828 SH3RF2Q8TEC5 729 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 KBTBD7Q8WVZ9 684 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 FAM84AQ96KN4 292 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 FGFBP2Q9BYJ0 223 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 MTMR12Q9C0I1 747 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 LINC00597Q9H2U6 94 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 TRPC7Q9HCX4 862 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 INTS13Q9NVM9 706 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 KBTBD4Q9NVX7 518 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 SDK1Q7Z5N4 2213 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 ASPMQ8IZT6 3477 aa12.67□□□□□ -0.38
CKAP4-202ENST00000552828 GREB1Q4ZG55 1949 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 BCLAF3A2AJT9 711 aaKnown RBP12.66□□□□□ -0.38
CKAP4-202ENST00000552828 GOLGA8IPA6NC78 632 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 GOLGA8JA6NMD2 632 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 DCLK1O15075 740 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 ATP2C2O75185 946 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 KCNK5O95279 499 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 KRT19P08727 400 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 PFKFB1P16118 471 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 HDCP19113 662 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 LMO2P25791 158 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 ZXDBP98169 803 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 KCNB1Q14721 858 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 MAPRE1Q15691 268 aaKnown RBP12.66□□□□□ -0.38
CKAP4-202ENST00000552828 C11orf74Q86VG3 221 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 SCN4BQ8IWT1 228 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 CEP57L1Q8IYX8 460 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 GPD1LQ8N335 351 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 USP33Q8TEY7 942 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 HPDLQ96IR7 371 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 TTLL2Q9BWV7 592 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 SMOC1Q9H4F8 434 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 CRTAC1Q9NQ79 661 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 MAGEC2Q9UBF1 373 aaPredicted RBP12.66□□□□□ -0.38
CKAP4-202ENST00000552828 USP25Q9UHP3 1055 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 CDH9Q9ULB4 789 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 DENND4CQ5VZ89 1909 aa12.66□□□□□ -0.38
CKAP4-202ENST00000552828 PTPRJQ12913 1337 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 FAM237AA0A1B0GTK4 181 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 K7EQS6 105 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 NFATC1O95644 943 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 CAVIN2O95810 425 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 FAM163BP0C2L3 166 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 TMEM191BP0C7N4 346 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 SLFN14P0C7P3 912 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 IDEP14735 1019 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 WARSP23381 471 aaKnown RBP12.65□□□□□ -0.38
CKAP4-202ENST00000552828 OPRD1P41143 372 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 SYKP43405 635 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 PPP3CCP48454 512 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 NOP14P78316 857 aaKnown RBP12.65□□□□□ -0.38
CKAP4-202ENST00000552828 SLC7A9P82251 487 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 SURF1Q15526 300 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 DUOXA2Q1HG44 320 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 GAB4Q2WGN9 574 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 RNF43Q68DV7 783 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 TCEAL6Q6IPX3 200 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 DENND5BQ6ZUT9 1274 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 RASSF3Q86WH2 238 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 CCDC65Q8IXS2 484 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 OR5B17Q8NGF7 314 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 MYCBPAPQ8TBZ2 947 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 TCEAL3Q969E4 200 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 MYLPFQ96A32 169 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 ANKRD36BP1Q96IX9 119 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 SYT15Q9BQS2 421 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 TRIM9Q9C026 710 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 PCIF1Q9H4Z3 704 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 PANK4Q9NVE7 773 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 EHD2Q9NZN4 543 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 HPSEQ9Y251 543 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 ZZEF1O43149 2961 aa12.65□□□□□ -0.38
CKAP4-202ENST00000552828 RALGAPA1Q6GYQ0 2036 aa12.64□□□□□ -0.39
CKAP4-202ENST00000552828 OBSL1O75147 1896 aa12.64□□□□□ -0.39
CKAP4-202ENST00000552828 SPAG17Q6Q759 2223 aa12.64□□□□□ -0.39
CKAP4-202ENST00000552828 A0A0A0MRY4 1105 aa12.64□□□□□ -0.39
CKAP4-202ENST00000552828 ZNF840PA6NDX5 716 aa12.64□□□□□ -0.39
CKAP4-202ENST00000552828 ZNF233A6NK53 670 aa12.64□□□□□ -0.39
CKAP4-202ENST00000552828 LEFTY2O00292 366 aa12.64□□□□□ -0.39
CKAP4-202ENST00000552828 PRPF6O94906 941 aaKnown RBP12.64□□□□□ -0.39
CKAP4-202ENST00000552828 OLFM2O95897 454 aa12.64□□□□□ -0.39
CKAP4-202ENST00000552828 CHRM1P11229 460 aaPredicted RBP12.64□□□□□ -0.39
CKAP4-202ENST00000552828 BDNFP23560 247 aa12.64□□□□□ -0.39
CKAP4-202ENST00000552828 HOXD13P35453 343 aa12.64□□□□□ -0.39
CKAP4-202ENST00000552828 NDUFA8P51970 172 aa12.64□□□□□ -0.39
CKAP4-202ENST00000552828 USP46P62068 366 aa12.64□□□□□ -0.39
CKAP4-202ENST00000552828 CREB5Q02930 508 aa12.64□□□□□ -0.39
CKAP4-202ENST00000552828 USP39Q53GS9 565 aaKnown RBP12.64□□□□□ -0.39
CKAP4-202ENST00000552828 PMS2CLQ68D20 193 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms