RNA–Protein interactions for RNA: ENST00000552744.5

SYT1-212, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-212ENST00000552744 RBM15BQ8NDT2 890 aaKnown RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 SHKBP1Q8TBC3 707 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 CCDC110Q8TBZ0 833 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 TMEM143Q96AN5 459 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 SKA1Q96BD8 255 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 RMDN3Q96TC7 470 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 ST6GALNAC4Q9H4F1 302 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 TMOD2Q9NZR1 351 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 TJP2Q9UDY2 1190 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 AGO2Q9UKV8 859 aaKnown RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 ZNF831Q5JPB2 1677 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 ZNF541Q9H0D2 1346 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 IQANK1A0A1B0GTG1 560 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 TCRBV9S1A1TA0A576 114 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 TRIM49D1C9J1S8 452 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 I3L4J1 428 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 COPEO14579 308 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 IRF6O14896 467 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 ZNF862O60290 1169 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 ITGAVP06756 1048 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 RARBP10826 455 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 MMP8P22894 467 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 PSMA2P25787 234 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 RFC1P35251 1148 aaPredicted RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 ORC1Q13415 861 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 TAF5Q15542 800 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 STRIP1Q5VSL9 837 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 GPAT2Q6NUI2 795 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 RIPOR1Q6ZS17 1223 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 DPH6Q7L8W6 267 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 PRPF39Q86UA1 669 aaKnown RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 RFX6Q8HWS3 928 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 SMC1BQ8NDV3 1235 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 ZNF398Q8TD17 642 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 CCDC124Q96CT7 223 aaKnown RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 FBXL18Q96ME1 805 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 TUBGCP5Q96RT8 1024 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 TBC1D22BQ9NU19 505 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 SLC9A2Q9UBY0 812 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 ZNRF3Q9ULT6 936 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 PIK3R2O00459 728 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 ABLIM1O14639 778 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 CIB2O75838 187 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 RTN3O95197 1032 aaPredicted RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 TOP3BO95985 862 aaKnown RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 CST3P01034 146 aaPredicted RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 C4BPAP04003 597 aaKnown RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 LYNP07948 512 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 ANPEPP15144 967 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 CD19P15391 556 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 GSTT1P30711 240 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 RPS6KA3P51812 740 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 HIRAP54198 1017 aaPredicted RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 EPHB1P54762 984 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 AQP5P55064 265 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 SNRPFP62306 86 aaKnown RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 ZNF200P98182 395 aaPredicted RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 PRKD1Q15139 912 aaPredicted RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 C6orf163Q5TEZ5 329 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 ARHGEF16Q5VV41 709 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 NPNTQ6UXI9 565 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 TAS1R3Q7RTX0 852 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 PHF13Q86YI8 300 aaPredicted RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 SCUBE1Q8IWY4 988 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 ARHGAP24Q8N264 748 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 NAT8LQ8N9F0 302 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 SYTL5Q8TDW5 730 aaPredicted RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 PYDC1Q8WXC3 89 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 USP6NLQ92738 828 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 SRPK1Q96SB4 655 aaKnown RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 TRIM56Q9BRZ2 755 aaKnown RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 TCHPQ9BT92 498 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 TUBB6Q9BUF5 446 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 TARS2Q9BW92 718 aaKnown RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 ZNF341Q9BYN7 854 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 IMPG2Q9BZV3 1241 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 TMEM39BQ9GZU3 492 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 POLR3FQ9H1D9 316 aaPredicted RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 DRG1Q9Y295 367 aaKnown RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 CTDP1Q9Y5B0 961 aaPredicted RBP8.16□□□□□ -1.1
SYT1-212ENST00000552744 SNCAIPQ9Y6H5 919 aa8.16□□□□□ -1.1
SYT1-212ENST00000552744 RBBP6Q7Z6E9 1792 aaKnown RBP8.15□□□□□ -1.1
SYT1-212ENST00000552744 KLHL33A6NCF5 533 aa8.15□□□□□ -1.1
SYT1-212ENST00000552744 TXNDC9O14530 226 aa8.15□□□□□ -1.1
SYT1-212ENST00000552744 EXTL3O43909 919 aa8.15□□□□□ -1.1
SYT1-212ENST00000552744 OPHN1O60890 802 aa8.15□□□□□ -1.1
SYT1-212ENST00000552744 ZC3H11AO75152 810 aaKnown RBP eCLIP8.15□□□□□ -1.1
SYT1-212ENST00000552744 RBP3P10745 1247 aa8.15□□□□□ -1.1
SYT1-212ENST00000552744 NPR1P16066 1061 aa8.15□□□□□ -1.1
SYT1-212ENST00000552744 IL1R2P27930 398 aa8.15□□□□□ -1.1
SYT1-212ENST00000552744 ALDH1B1P30837 517 aa8.15□□□□□ -1.1
SYT1-212ENST00000552744 HSD17B4P51659 736 aa8.15□□□□□ -1.1
SYT1-212ENST00000552744 EIF3EP60228 445 aaKnown RBP8.15□□□□□ -1.1
SYT1-212ENST00000552744 BST1Q10588 318 aa8.15□□□□□ -1.1
SYT1-212ENST00000552744 LAMB3Q13751 1172 aa8.15□□□□□ -1.1
SYT1-212ENST00000552744 NCOA4Q13772 614 aa8.15□□□□□ -1.1
SYT1-212ENST00000552744 UBAP2LQ14157 1087 aaKnown RBP8.15□□□□□ -1.1
SYT1-212ENST00000552744 PGM5Q15124 567 aa8.15□□□□□ -1.1
SYT1-212ENST00000552744 CHI3L2Q15782 390 aa8.15□□□□□ -1.1
SYT1-212ENST00000552744 TRIM72Q6ZMU5 477 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms