RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 LBX2Q6XYB7 198 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 RGS9BPQ6ZS82 235 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 PDIK1LQ8N165 341 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 FAM167AQ96KS9 214 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 SDCBP2Q9H190 292 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 SMYD3Q9H7B4 428 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 PPCSQ9HAB8 311 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 NPHS2Q9NP85 383 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 CHMP2BQ9UQN3 213 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 NFICP08651 508 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 RBP3P10745 1247 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 MMRN1Q13201 1228 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 NPNTQ6UXI9 565 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 ZC3H18Q86VM9 953 aaKnown RBP13.65□□□□□ -0.22
CACNB3-219ENST00000551544 TCP10LQ8TDR4 215 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 UTP4Q969X6 686 aaKnown RBP13.65□□□□□ -0.22
CACNB3-219ENST00000551544 LHX5Q9H2C1 402 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 RPF1Q9H9Y2 349 aaKnown RBP13.65□□□□□ -0.22
CACNB3-219ENST00000551544 EFR3BQ9Y2G0 817 aa13.65□□□□□ -0.22
CACNB3-219ENST00000551544 ZBTB42B2RXF5 422 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 MCF2LO15068 1137 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 B4GALT4O60513 344 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 DIAPH2O60879 1101 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 DCTN3O75935 186 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 RNF8O76064 485 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 ZWINTO95229 277 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 PGK2P07205 417 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 CLCN3P51790 818 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 OVGP1Q12889 678 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 KLHL38Q2WGJ6 581 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 ADGRD1Q6QNK2 874 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 TSHZ1Q6ZSZ6 1077 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 SPATA18Q8TC71 538 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 C10orf82Q8WW14 230 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 RAB3IPQ96QF0 476 aaPredicted RBP13.64□□□□□ -0.23
CACNB3-219ENST00000551544 PPP1R16BQ96T49 567 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 ACSS3Q9H6R3 686 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 SLC17A7Q9P2U7 560 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 SIX4Q9UIU6 781 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 M0QYV0 167 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 ACKR2O00590 384 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 CBX6O95503 412 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 EDNRBP24530 442 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 SH3PXD2AQ5TCZ1 1133 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 RIOX2Q8IUF8 465 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 KIRREL3Q8IZU9 778 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 UBA3Q8TBC4 463 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 C2orf40Q9H1Z8 148 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 MINDY3Q9H8M7 445 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 DCTN4Q9UJW0 460 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 ZMYND8Q9ULU4 1186 aaPredicted RBP13.64□□□□□ -0.23
CACNB3-219ENST00000551544 USP18Q9UMW8 372 aa13.64□□□□□ -0.23
CACNB3-219ENST00000551544 MICAL2O94851 1124 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 ITGB3P05106 788 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 TGFB3P10600 412 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 IRX1P78414 480 aaPredicted RBP13.63□□□□□ -0.23
CACNB3-219ENST00000551544 PTPN11Q06124 597 aaPredicted RBP13.63□□□□□ -0.23
CACNB3-219ENST00000551544 RASA2Q15283 850 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 RAB6CQ53S08 254 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 FAM102AQ5T9C2 384 aaPredicted RBP13.63□□□□□ -0.23
CACNB3-219ENST00000551544 DARS2Q6PI48 645 aaKnown RBP13.63□□□□□ -0.23
CACNB3-219ENST00000551544 BZW1Q7L1Q6 419 aaKnown RBP13.63□□□□□ -0.23
CACNB3-219ENST00000551544 IGDCC3Q8IVU1 814 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 C1orf127Q8N9H9 656 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 SLC4A11Q8NBS3 891 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 FNIP1Q8TF40 1166 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 GPR20Q99678 358 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 ADPGKQ9BRR6 497 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 ELOVL4Q9GZR5 314 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 SPATC1LQ9H0A9 340 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 RAB6CQ9H0N0 254 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 CDT1Q9H211 546 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 PTPRHQ9HD43 1115 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 APOC4-APOC2K7ER74 178 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 KIF3CO14782 793 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 APOC2P02655 101 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 PROZP22891 400 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 ELK3P41970 407 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 RNASELQ05823 741 aaKnown RBP13.63□□□□□ -0.23
CACNB3-219ENST00000551544 DPYSL3Q14195 570 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 TAF1BQ53T94 588 aaPredicted RBP13.63□□□□□ -0.23
CACNB3-219ENST00000551544 FYB2Q5VWT5 728 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 GADL1Q6ZQY3 521 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 DCAKDQ8WVC6 231 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 HEXIM2Q96MH2 286 aaKnown RBP13.63□□□□□ -0.23
CACNB3-219ENST00000551544 FRMD8P1Q9BZ68 369 aaPredicted RBP13.63□□□□□ -0.23
CACNB3-219ENST00000551544 WDR35Q9P2L0 1181 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 LACTBL1A8MY62 500 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 FZD9O00144 591 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 GRAP2O75791 330 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 ATP5HO75947 161 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 ECM2O94769 699 aaPredicted RBP13.63□□□□□ -0.23
CACNB3-219ENST00000551544 TRUB2O95900 331 aaKnown RBP13.63□□□□□ -0.23
CACNB3-219ENST00000551544 CDH6P55285 790 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 VGLL4Q14135 290 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 TAZQ16635 292 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 CDO1Q16878 200 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 EFCAB12Q6NXP0 572 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 NLRP9Q7RTR0 991 aa13.63□□□□□ -0.23
CACNB3-219ENST00000551544 CCDC125Q86Z20 511 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms