RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 PQBP1O60828 265 aaKnown RBP20.71■□□□□ 0.91
SSH1-209ENST00000551165 SELPP16109 830 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 RPL9P32969 192 aaKnown RBP20.71■□□□□ 0.91
SSH1-209ENST00000551165 AARSP49588 968 aaKnown RBP eCLIP20.71■□□□□ 0.91
SSH1-209ENST00000551165 GRIK3Q13003 919 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 KLF1Q13351 362 aaPredicted RBP20.71■□□□□ 0.91
SSH1-209ENST00000551165 CYP1B1Q16678 543 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 CCDC137Q6PK04 289 aaKnown RBP20.71■□□□□ 0.91
SSH1-209ENST00000551165 SLC24A5Q71RS6 500 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 CFAP57Q96MR6 1250 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 SLITRK1Q96PX8 696 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 TET1Q8NFU7 2136 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 RRP9O43818 475 aaKnown RBP20.71■□□□□ 0.91
SSH1-209ENST00000551165 DDHD2O94830 711 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 HSPA6P17066 643 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 BCAT1P54687 386 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 TUSC3Q13454 348 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 CLUL1Q15846 466 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 MAP9Q49MG5 647 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 KAZNQ674X7 775 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 JAMLQ86YT9 394 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 RTP3Q9BQQ7 232 aa20.71■□□□□ 0.91
SSH1-209ENST00000551165 ATP8B1O43520 1251 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 SETSIPP0DME0 302 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 PDGFRAP16234 1089 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 TFE3P19532 575 aaPredicted RBP20.7■□□□□ 0.9
SSH1-209ENST00000551165 MIPP30301 263 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 COILP38432 576 aaPredicted RBP20.7■□□□□ 0.9
SSH1-209ENST00000551165 CBX1P83916 185 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 SLC6A3Q01959 620 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 SMC1AQ14683 1233 aaKnown RBP20.7■□□□□ 0.9
SSH1-209ENST00000551165 CDO1Q16878 200 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 DBF4BQ8NFT6 615 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 PEBP4Q96S96 227 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 HNRNPABQ99729 332 aaKnown RBP20.7■□□□□ 0.9
SSH1-209ENST00000551165 BEGAINQ9BUH8 593 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 PLVAPQ9BX97 442 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 TMEM30AQ9NV96 361 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 MTUS1Q9ULD2 1270 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 GPD1P21695 349 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 CHRNA3P32297 505 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 ZNF143P52747 638 aaPredicted RBP20.7■□□□□ 0.9
SSH1-209ENST00000551165 CCDC14Q49A88 953 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 LRRC38Q5VT99 294 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 ADAM33Q9BZ11 813 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 OGFRQ9NZT2 677 aa20.7■□□□□ 0.9
SSH1-209ENST00000551165 CD48P09326 243 aa20.69■□□□□ 0.9
SSH1-209ENST00000551165 SKIP12755 728 aa20.69■□□□□ 0.9
SSH1-209ENST00000551165 CACNA2D1P54289 1103 aa20.69■□□□□ 0.9
SSH1-209ENST00000551165 FAM189BP81408 668 aa20.69■□□□□ 0.9
SSH1-209ENST00000551165 ATP11AP98196 1134 aa20.69■□□□□ 0.9
SSH1-209ENST00000551165 PIGZQ86VD9 579 aa20.69■□□□□ 0.9
SSH1-209ENST00000551165 STK32AQ8WU08 396 aa20.69■□□□□ 0.9
SSH1-209ENST00000551165 SYT15Q9BQS2 421 aa20.69■□□□□ 0.9
SSH1-209ENST00000551165 RHOBTB2Q9BYZ6 727 aa20.69■□□□□ 0.9
SSH1-209ENST00000551165 UBN1Q9NPG3 1134 aa20.69■□□□□ 0.9
SSH1-209ENST00000551165 PCYOX1Q9UHG3 505 aa20.69■□□□□ 0.9
SSH1-209ENST00000551165 OGDHLQ9ULD0 1010 aa20.69■□□□□ 0.9
SSH1-209ENST00000551165 LRRD1A4D1F6 860 aa20.68■□□□□ 0.9
SSH1-209ENST00000551165 C3orf70A6NLC5 250 aaPredicted RBP20.68■□□□□ 0.9
SSH1-209ENST00000551165 SPOCD1Q6ZMY3 1216 aa20.68■□□□□ 0.9
SSH1-209ENST00000551165 RCOR2Q8IZ40 523 aa20.68■□□□□ 0.9
SSH1-209ENST00000551165 TSEN2Q8NCE0 465 aaKnown RBP20.68■□□□□ 0.9
SSH1-209ENST00000551165 SCLYQ96I15 445 aa20.68■□□□□ 0.9
SSH1-209ENST00000551165 DUSP16Q9BY84 665 aa20.68■□□□□ 0.9
SSH1-209ENST00000551165 LRRC19Q9H756 370 aa20.68■□□□□ 0.9
SSH1-209ENST00000551165 EPHB4P54760 987 aa20.68■□□□□ 0.9
SSH1-209ENST00000551165 HLTFQ14527 1009 aaKnown RBP eCLIP20.68■□□□□ 0.9
SSH1-209ENST00000551165 CYP4V2Q6ZWL3 525 aaPredicted RBP20.68■□□□□ 0.9
SSH1-209ENST00000551165 CCDC105Q8IYK2 499 aa20.68■□□□□ 0.9
SSH1-209ENST00000551165 SEC14L1Q92503 715 aa20.68■□□□□ 0.9
SSH1-209ENST00000551165 PCED1BQ96HM7 432 aa20.68■□□□□ 0.9
SSH1-209ENST00000551165 RPL34P49207 117 aaKnown RBP20.67■□□□□ 0.9
SSH1-209ENST00000551165 NDUFV1P49821 464 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 MNX1P50219 401 aaPredicted RBP20.67■□□□□ 0.9
SSH1-209ENST00000551165 GATMP50440 423 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 DUPD1Q68J44 220 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 GLB1LQ6UWU2 654 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 CLEC20AQ6ZU45 233 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 TMEM86AQ8N2M4 240 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 C12orf50Q8NA57 414 aaPredicted RBP20.67■□□□□ 0.9
SSH1-209ENST00000551165 TMEM209Q96SK2 561 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 KCNK16Q96T55 309 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 ERP44Q9BS26 406 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 CNPY3Q9BT09 278 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 MED10Q9BTT4 135 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 DCLK3Q9C098 648 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 LCMT1Q9UIC8 334 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 EOMESO95936 686 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 CDKN2BP42772 138 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 LHX1P48742 406 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 MAP3K7CLP57077 242 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 DHX34Q14147 1143 aaKnown RBP20.67■□□□□ 0.9
SSH1-209ENST00000551165 RSPH1Q8WYR4 309 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.67■□□□□ 0.9
SSH1-209ENST00000551165 PCDH10Q9P2E7 1040 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 DNAJB4Q9UDY4 337 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 HPCAL4Q9UM19 191 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 USP18Q9UMW8 372 aa20.67■□□□□ 0.9
SSH1-209ENST00000551165 SNX24Q9Y343 169 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms