RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 SMARCB1Q12824 385 aa14.29□□□□□ -0.12
ERBB3-215ENST00000550828 DDR2Q16832 855 aa14.29□□□□□ -0.12
ERBB3-215ENST00000550828 MGAT5BQ3V5L5 792 aa14.29□□□□□ -0.12
ERBB3-215ENST00000550828 TMEM139Q8IV31 216 aa14.29□□□□□ -0.12
ERBB3-215ENST00000550828 CNGA4Q8IV77 575 aa14.29□□□□□ -0.12
ERBB3-215ENST00000550828 EFHBQ8N7U6 833 aa14.29□□□□□ -0.12
ERBB3-215ENST00000550828 ANKRD52Q8NB46 1076 aa14.29□□□□□ -0.12
ERBB3-215ENST00000550828 GPR152Q8TDT2 470 aa14.29□□□□□ -0.12
ERBB3-215ENST00000550828 SECISBP2LQ93073 1101 aaKnown RBP14.29□□□□□ -0.12
ERBB3-215ENST00000550828 SMARCD1Q96GM5 515 aa14.29□□□□□ -0.12
ERBB3-215ENST00000550828 SEPT5Q99719 369 aaPredicted RBP14.29□□□□□ -0.12
ERBB3-215ENST00000550828 AGPAT1Q99943 283 aa14.29□□□□□ -0.12
ERBB3-215ENST00000550828 DUSP16Q9BY84 665 aa14.29□□□□□ -0.12
ERBB3-215ENST00000550828 NUCKS1Q9H1E3 243 aaKnown RBP14.29□□□□□ -0.12
ERBB3-215ENST00000550828 TJP2Q9UDY2 1190 aa14.29□□□□□ -0.12
ERBB3-215ENST00000550828 NENFQ9UMX5 172 aa14.29□□□□□ -0.12
ERBB3-215ENST00000550828 C5orf42Q9H799 3197 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 NRG2O14511 850 aaPredicted RBP14.28□□□□□ -0.12
ERBB3-215ENST00000550828 TNFRSF10BO14763 440 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 TBX10O75333 385 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 C1RP00736 705 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 CDH5P33151 784 aaPredicted RBP14.28□□□□□ -0.12
ERBB3-215ENST00000550828 HELZP42694 1942 aaKnown RBP14.28□□□□□ -0.12
ERBB3-215ENST00000550828 GPD2P43304 727 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 BCAT1P54687 386 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 NOMO3P69849 1222 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 DLX2Q07687 328 aaPredicted RBP14.28□□□□□ -0.12
ERBB3-215ENST00000550828 ADAM15Q13444 863 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 MTMR3Q13615 1198 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 STILQ15468 1287 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 CCDC85BQ15834 202 aaPredicted RBP14.28□□□□□ -0.12
ERBB3-215ENST00000550828 CTC1Q2NKJ3 1217 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 ASTE1Q2TB18 679 aaPredicted RBP14.28□□□□□ -0.12
ERBB3-215ENST00000550828 VSTM1Q6UX27 236 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 CCDC186Q7Z3E2 898 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 DNAAF5Q86Y56 855 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 SCN4BQ8IWT1 228 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 MICALL1Q8N3F8 863 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 C12orf76Q8N812 135 aaPredicted RBP14.28□□□□□ -0.12
ERBB3-215ENST00000550828 SLC30A5Q8TAD4 765 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 SLC35F5Q8WV83 523 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 PANX2Q96RD6 677 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 CDCA3Q99618 268 aaPredicted RBP14.28□□□□□ -0.12
ERBB3-215ENST00000550828 DMAP1Q9NPF5 467 aaPredicted RBP14.28□□□□□ -0.12
ERBB3-215ENST00000550828 TAS2R14Q9NYV8 317 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 HSFX1Q9UBD0 423 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 CDH22Q9UJ99 828 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 BDP1A6H8Y1 2624 aa14.28□□□□□ -0.12
ERBB3-215ENST00000550828 TCF20Q9UGU0 1960 aaKnown RBP14.27□□□□□ -0.12
ERBB3-215ENST00000550828 ATP8B3O60423 1300 aa14.27□□□□□ -0.12
ERBB3-215ENST00000550828 PRRG1O14668 218 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 ZMYND10O75800 440 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 PAPLNO95428 1278 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 CYP1A1P04798 512 aaPredicted RBP14.27□□□□□ -0.13
ERBB3-215ENST00000550828 TPM1P09493 284 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 LTBRP36941 435 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 EIF4A3P38919 411 aaKnown RBP14.27□□□□□ -0.13
ERBB3-215ENST00000550828 RGS7P49802 495 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 USP46P62068 366 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 BST2Q10589 180 aaKnown RBP14.27□□□□□ -0.13
ERBB3-215ENST00000550828 TWF1Q12792 350 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 PTPN20Q4JDL3 420 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 NAA35Q5VZE5 725 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 PMF1Q6P1K2 205 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 SYCE2Q6PIF2 218 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 TMEM184AQ6ZMB5 413 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 PIGZQ86VD9 579 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 ZNF677Q86XU0 584 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 C1orf131Q8NDD1 294 aaKnown RBP14.27□□□□□ -0.13
ERBB3-215ENST00000550828 GIPC2Q8TF65 315 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 ZNF707Q96C28 371 aaPredicted RBP14.27□□□□□ -0.13
ERBB3-215ENST00000550828 C8orf48Q96LL4 319 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 LHX5Q9H2C1 402 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 CLEC1BQ9P126 229 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 MAFFQ9ULX9 164 aa14.27□□□□□ -0.13
ERBB3-215ENST00000550828 A0A087X0T9 212 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 XPO1O14980 1071 aaKnown RBP14.26□□□□□ -0.13
ERBB3-215ENST00000550828 CCL16O15467 120 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 MED7O43513 233 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 FAM228BP0C875 321 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 SETSIPP0DME0 302 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 UNGP13051 313 aaPredicted RBP14.26□□□□□ -0.13
ERBB3-215ENST00000550828 HMGA1P17096 107 aaKnown RBP14.26□□□□□ -0.13
ERBB3-215ENST00000550828 ELF1P32519 619 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 GRIK1P39086 918 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 PLA2G4AP47712 749 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 CDK17Q00537 523 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 MAPK8IP2Q13387 824 aaPredicted RBP14.26□□□□□ -0.13
ERBB3-215ENST00000550828 CLEC16AQ2KHT3 1053 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 TDRD12Q587J7 1177 aaKnown RBP14.26□□□□□ -0.13
ERBB3-215ENST00000550828 BHLHA9Q7RTU4 235 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 SCAMP5Q8TAC9 235 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 HDAC7Q8WUI4 952 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 CPXM1Q96SM3 734 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 LRRC3Q9BY71 257 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 DNAI2Q9GZS0 605 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 PLEKHA4Q9H4M7 779 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 ZNF334Q9HCZ1 680 aaPredicted RBP14.26□□□□□ -0.13
ERBB3-215ENST00000550828 HESX1Q9UBX0 185 aa14.26□□□□□ -0.13
ERBB3-215ENST00000550828 MUC3AQ02505 3323 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms