RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 APBB2Q92870 758 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 BARX2Q9UMQ3 279 aaPredicted RBP12.71□□□□□ -0.38
NR4A1-215ENST00000550557 WNT7AO00755 349 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 SLC9A3R1O14745 358 aaPredicted RBP12.71□□□□□ -0.38
NR4A1-215ENST00000550557 ENDOD1O94919 500 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 HIST1H2AGP0C0S8 130 aaPredicted RBP12.71□□□□□ -0.38
NR4A1-215ENST00000550557 ITGB5P18084 799 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 HIST1H2ADP20671 130 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 MYBPC2Q14324 1141 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 IL17AQ16552 155 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 P3H1Q32P28 736 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 KLHDC7AQ5VTJ3 777 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 TMEM86AQ8N2M4 240 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 HIST1H2AHQ96KK5 128 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 GBP5Q96PP8 586 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 PPP1R2P1Q96PQ5 205 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 HIST1H2AJQ99878 128 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 H2AFJQ9BTM1 129 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 RNF19AQ9NV58 838 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 GOLGA8QA0A0J9YX86 632 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 GOLGA8OA6NCC3 632 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 GOLGA8NF8WBI6 632 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 SZRD1Q7Z422 152 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 MS4A14Q96JA4 679 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 ZBTB45Q96K62 511 aaPredicted RBP12.7□□□□□ -0.38
NR4A1-215ENST00000550557 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.7□□□□□ -0.38
NR4A1-215ENST00000550557 RBPJLQ9UBG7 517 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 SMIM35A0A1B0GVV1 85 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 KLRG2A4D1S0 409 aaPredicted RBP12.7□□□□□ -0.38
NR4A1-215ENST00000550557 ZBTB39O15060 712 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 MTSS1O43312 755 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 KDM1AO60341 852 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 PSMD10O75832 226 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 GLUD1P00367 558 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 GUCY1A3Q02108 690 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 MUM1Q2TAK8 710 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 RASAL3Q86YV0 1011 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 ARNTL2Q8WYA1 636 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 INPP4AQ96PE3 977 aaPredicted RBP12.7□□□□□ -0.38
NR4A1-215ENST00000550557 YIPF2Q9BWQ6 316 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 FRMPD4Q14CM0 1322 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 ROBO3Q96MS0 1386 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 GMNCA6NCL1 334 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 KRT14P02533 472 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 SYN1P17600 705 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 CORO7P57737 925 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 TMEM119Q4V9L6 283 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 PAPD7Q5XG87 772 aaKnown RBP12.7□□□□□ -0.38
NR4A1-215ENST00000550557 RETSATQ6NUM9 610 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 SRRM1Q8IYB3 904 aaKnown RBP12.7□□□□□ -0.38
NR4A1-215ENST00000550557 FEZF2Q8TBJ5 459 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 RNF217Q8TC41 542 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 MTMR9Q96QG7 549 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 VPS11Q9H270 941 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 LATS2Q9NRM7 1088 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 RBM12Q9NTZ6 932 aaKnown RBP12.7□□□□□ -0.38
NR4A1-215ENST00000550557 BLOC1S4Q9NUP1 217 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 SLC13A4Q9UKG4 626 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 RWDD3Q9Y3V2 267 aa12.7□□□□□ -0.38
NR4A1-215ENST00000550557 TBC1D3BA6NDS4 549 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 NT5C1B-RDH14C9J2C7 533 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 NDUFS3O75489 264 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 PLEKP08567 350 aaPredicted RBP12.69□□□□□ -0.38
NR4A1-215ENST00000550557 NDST1P52848 882 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 PPP2R2AP63151 447 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 IL9RQ01113 521 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 FPGSQ05932 587 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 PSMD5Q16401 504 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 PSRC1Q6PGN9 363 aaPredicted RBP12.69□□□□□ -0.38
NR4A1-215ENST00000550557 OOSP2Q86WS3 158 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 TACO1Q9BSH4 297 aaKnown RBP12.69□□□□□ -0.38
NR4A1-215ENST00000550557 TMEM134Q9H6X4 195 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 TTI1O43156 1089 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 PCDH8O95206 1070 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 ACSL3O95573 720 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 GLRA2P23416 452 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 SLCO1A2P46721 670 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 IRAK1P51617 712 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 SMAD1Q15797 465 aaKnown RBP12.69□□□□□ -0.38
NR4A1-215ENST00000550557 SLC24A5Q71RS6 500 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 RGL4Q8IZJ4 473 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 LENG1Q96BZ8 264 aaPredicted RBP12.69□□□□□ -0.38
NR4A1-215ENST00000550557 C12orf42Q96LP6 360 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 FAM105AQ9NUU6 356 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 TNFSF13BQ9Y275 285 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 PKP3Q9Y446 797 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 TMCC1O94876 653 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 NAB2Q15742 525 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 GJB7Q6PEY0 223 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 C1orf54Q8WWF1 131 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 EPN3Q9H201 632 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 SMARCAL1Q9NZC9 954 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 GIT1Q9Y2X7 761 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 KLRC4O43908 158 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 SYF2O95926 243 aaKnown RBP12.69□□□□□ -0.38
NR4A1-215ENST00000550557 ACLYP53396 1101 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 ATAT1Q5SQI0 421 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 C6orf118Q5T5N4 469 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 SH2D3CQ8N5H7 860 aa12.69□□□□□ -0.38
NR4A1-215ENST00000550557 SLC25A41Q8N5S1 370 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms