RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 CYTH4Q9UIA0 394 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 CD207Q9UJ71 328 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 NOCTQ9UK39 431 aaKnown RBP13.81□□□□□ -0.2
RAB5C-206ENST00000550406 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.81□□□□□ -0.21e-7■□□□□ 8.6
RAB5C-206ENST00000550406 DOCK8Q8NF50 2099 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 SLC38A8A6NNN8 435 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 TRIM66O15016 1216 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 ADCY5O95622 1261 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 LRG1P02750 347 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 SRGAP2BP0DMP2 458 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 NPR3P17342 541 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 GPD2P43304 727 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 EPHB3P54753 998 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 BPIFB4P59827 614 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 RPL10AP62906 217 aaKnown RBP13.8□□□□□ -0.2
RAB5C-206ENST00000550406 ZBED6P86452 979 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 TFF2Q03403 129 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 ARID5AQ03989 594 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 STILQ15468 1287 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 TAF3Q5VWG9 929 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 POTEHQ6S545 545 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 GPRIN1Q7Z2K8 1008 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 TMC8Q8IU68 726 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 SMRP1Q8NCR6 262 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.8□□□□□ -0.2
RAB5C-206ENST00000550406 SLC35F5Q8WV83 523 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 SUSD6Q92537 303 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 SMG7Q92540 1137 aaKnown RBP13.8□□□□□ -0.2
RAB5C-206ENST00000550406 PSMG2Q969U7 264 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 SYT11Q9BT88 431 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 GRPEL1Q9HAV7 217 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 IL21Q9HBE4 155 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 DMAP1Q9NPF5 467 aaPredicted RBP13.8□□□□□ -0.2
RAB5C-206ENST00000550406 IL37Q9NZH6 218 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 PCDHGC3Q9UN70 934 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 ATP8B3O60423 1300 aa13.8□□□□□ -0.2
RAB5C-206ENST00000550406 SPTBN5Q9NRC6 3674 aaKnown RBP13.79□□□□□ -0.2
RAB5C-206ENST00000550406 M0QYV0 167 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 MBTPS2O43462 519 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 MOSPD3O75425 235 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 MMEP08473 750 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 SKILP12757 684 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 FERP16591 822 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 PTPN2P17706 415 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 CCR2P41597 374 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 BCAT1P54687 386 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 EPHA5P54756 1037 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 FMO1Q01740 532 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 ITIH3Q06033 890 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 PLD1Q13393 1074 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 ARID5BQ14865 1188 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 LEXMQ3ZCV2 418 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 SFMBT2Q5VUG0 894 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 PMF1Q6P1K2 205 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 ELMSAN1Q6PJG2 1045 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 GRASPQ7Z6J2 395 aaPredicted RBP13.79□□□□□ -0.2
RAB5C-206ENST00000550406 PIGZQ86VD9 579 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 SCAMP5Q8TAC9 235 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 SECISBP2LQ93073 1101 aaKnown RBP13.79□□□□□ -0.2
RAB5C-206ENST00000550406 IQCDQ96DY2 449 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 ZNF512Q96ME7 567 aaPredicted RBP13.79□□□□□ -0.2
RAB5C-206ENST00000550406 PCDHB18PQ96TA0 734 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 UBXN6Q9BZV1 441 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 COG5Q9UP83 839 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 LUC7L2Q9Y383 392 aaKnown RBP13.79□□□□□ -0.2
RAB5C-206ENST00000550406 ASB3Q9Y575 518 aa13.79□□□□□ -0.2
RAB5C-206ENST00000550406 TCF20Q9UGU0 1960 aaKnown RBP13.78□□□□□ -0.2
RAB5C-206ENST00000550406 GOLGA6L3A6NEY3 463 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 XPO1O14980 1071 aaKnown RBP13.78□□□□□ -0.2
RAB5C-206ENST00000550406 MED7O43513 233 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 RHOP08100 348 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 ANXA13P27216 316 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 KRT9P35527 623 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 PRKCIP41743 596 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 RPL34P49207 117 aaKnown RBP13.78□□□□□ -0.2
RAB5C-206ENST00000550406 PGFP49763 221 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 ADKP55263 362 aaKnown RBP13.78□□□□□ -0.2
RAB5C-206ENST00000550406 CDR2Q01850 454 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 BST2Q10589 180 aaKnown RBP13.78□□□□□ -0.2
RAB5C-206ENST00000550406 ASIC2Q16515 512 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 MEA1Q16626 185 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 SLC5A9Q2M3M2 681 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 RAB41Q5JT25 222 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 PRSS36Q5K4E3 855 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 HGSNATQ68CP4 663 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 WDR59Q6PJI9 974 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 CYP26C1Q6V0L0 522 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 DENND5BQ6ZUT9 1274 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 TMEM150AQ86TG1 271 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 PASD1Q8IV76 773 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 NUP93Q8N1F7 819 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 SYN2Q92777 582 aaPredicted RBP13.78□□□□□ -0.2
RAB5C-206ENST00000550406 TCEAL4Q96EI5 215 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 MYRFLQ96LU7 910 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 CEP295NLQ96MC4 621 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 CORO1BQ9BR76 489 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 TTLL2Q9BWV7 592 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 LHX5Q9H2C1 402 aa13.78□□□□□ -0.2
RAB5C-206ENST00000550406 HESX1Q9UBX0 185 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms