RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	BPIFB1	Q8TDL5	484 aa		5.68	□□□□□ -1.5
CNOT2-222	ENST00000550155	RAPGEF4	Q8WZA2	1011 aa		5.68	□□□□□ -1.5
CNOT2-222	ENST00000550155	NT5C1B	Q96P26	610 aa		5.68	□□□□□ -1.5
CNOT2-222	ENST00000550155	BHMT2	Q9H2M3	363 aa		5.68	□□□□□ -1.5
CNOT2-222	ENST00000550155	ZMAT3	Q9HA38	289 aa	Known RBP	5.68	□□□□□ -1.5
CNOT2-222	ENST00000550155	CAPN8	A6NHC0	703 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	UBE2Q2L	H0YL09	131 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155		H7C1Q1	480 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	ERBB2	P04626	1255 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	CSF1R	P07333	972 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	SLC7A1	P30825	629 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	AGFG1	P52594	562 aa	Known RBP	5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	ODR4	Q5SWX8	454 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	MORN5	Q5VZ52	161 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	ZNF425	Q6IV72	752 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	SLC18B1	Q6NT16	456 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	NPNT	Q6UXI9	565 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	SERPINA13P	Q6UXR4	307 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	GLCCI1	Q86VQ1	547 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	RAB11FIP4	Q86YS3	637 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	SIRT6	Q8N6T7	355 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	TERB1	Q8NA31	727 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	ZNF518B	Q9C0D4	1074 aa		5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	A1CF	Q9NQ94	594 aa	Known RBP	5.67	□□□□□ -1.5
CNOT2-222	ENST00000550155	POC1B-GALNT4	F8VUJ3	575 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	MYO1F	O00160	1098 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	TUSC2	O75896	110 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	PDE8B	O95263	885 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	NHLRC4	P0CG21	123 aa	Predicted RBP	5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	EN2	P19622	333 aa	Predicted RBP	5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	INSC	Q1MX18	579 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	ZIK1	Q3SY52	487 aa	Predicted RBP	5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	MINDY4	Q4G0A6	757 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	CERCAM	Q5T4B2	595 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	SLC9A4	Q6AI14	798 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	ZNF66	Q6ZN08	573 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	CATSPERG	Q6ZRH7	1159 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	MAEA	Q7L5Y9	396 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	CHSY1	Q86X52	802 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	CHPF	Q8IZ52	775 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	GALNT4	Q8N4A0	578 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	DENND1A	Q8TEH3	1009 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	RPL36AL	Q969Q0	106 aa	Known RBP	5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	SNX18	Q96RF0	628 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	MACROD1	Q9BQ69	325 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	B3GNT5	Q9BYG0	378 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	DPH1	Q9BZG8	443 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	ANLN	Q9NQW6	1124 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	GABRQ	Q9UN88	632 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	USP22	Q9UPT9	525 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	SNX14	Q9Y5W7	946 aa		5.66	□□□□□ -1.5
CNOT2-222	ENST00000550155	AP4M1	O00189	453 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	RGS10	O43665	173 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	CHRM5	P08912	532 aa	Predicted RBP	5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	MYB	P10242	640 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	MYCL	P12524	364 aa	Predicted RBP	5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	CTGF	P29279	349 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	PTGER1	P34995	402 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	SUMO2	P61956	95 aa	Known RBP	5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	SSBP2	P81877	361 aa	Predicted RBP	5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	E2F1	Q01094	437 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	CCNI	Q14094	377 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	MLC1	Q15049	377 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	LY6K	Q17RY6	165 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	CEP78	Q5JTW2	689 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	MIS18BP1	Q6P0N0	1132 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	IL31RA	Q8NI17	732 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	TMEM171	Q8WVE6	324 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	RSPRY1	Q96DX4	576 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	NAF1	Q96HR8	494 aa	Known RBP	5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	PPP1R9B	Q96SB3	815 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	SH2D3A	Q9BRG2	576 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	C17orf80	Q9BSJ5	609 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	QTRT1	Q9BXR0	403 aa	Known RBP	5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	KRTAP9-8	Q9BYQ0	159 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	CIPC	Q9C0C6	399 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	TMEM60	Q9H2L4	133 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	FAM204A	Q9H8W3	233 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	GBA2	Q9HCG7	927 aa	Predicted RBP	5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	AMFR	Q9UKV5	643 aa		5.65	□□□□□ -1.5
CNOT2-222	ENST00000550155	SETD1B	Q9UPS6	1966 aa	Known RBP	5.65	□□□□□ -1.51
CNOT2-222	ENST00000550155	CFAP69	A5D8W1	941 aa		5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	FAM227A	F5H4B4	570 aa		5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	USP1	O94782	785 aa		5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	PHKG2	P15735	406 aa		5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	MTHFS	P49914	203 aa		5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	KRTAP10-11	P60412	298 aa		5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	DENND2C	Q68D51	928 aa		5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	KIRREL2	Q6UWL6	708 aa		5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	OVCH2	Q7RTZ1	564 aa		5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	CNGA4	Q8IV77	575 aa		5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	GALNT16	Q8N428	558 aa		5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	C5orf34	Q96MH7	638 aa		5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	LENG8	Q96PV6	779 aa	Predicted RBP	5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	FYTTD1	Q96QD9	318 aa	Known RBP	5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	C1orf112	Q9NSG2	853 aa		5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	TPCN1	Q9ULQ1	816 aa		5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	NOB1	Q9ULX3	412 aa	Known RBP	5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	BTBD3	Q9Y2F9	522 aa		5.64	□□□□□ -1.51
CNOT2-222	ENST00000550155	CES2	O00748	559 aa		5.63	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms