RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 KPNA7A9QM74 516 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 CSDE1O75534 798 aaKnown RBP10.48□□□□□ -0.73
RAB5B-206ENST00000549505 TTC4O95801 387 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 RPL9P32969 192 aaKnown RBP10.48□□□□□ -0.73
RAB5B-206ENST00000549505 MMP13P45452 471 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 TAF6P49848 677 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 SLC18A1P54219 525 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 BCAT1P54687 386 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 GYS2P54840 703 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 PLTPP55058 493 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 BST2Q10589 180 aaKnown RBP10.48□□□□□ -0.73
RAB5B-206ENST00000549505 CALCOCO2Q13137 446 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 PPP1R26Q5T8A7 1209 aaPredicted RBP10.48□□□□□ -0.73
RAB5B-206ENST00000549505 CYP4A22Q5TCH4 519 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 MFSD14CQ5VZR4 134 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 TXNRD3NBQ6F5E7 133 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 FAM183BPQ6ZVS7 135 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 RIBC1Q8N443 379 aaPredicted RBP10.48□□□□□ -0.73
RAB5B-206ENST00000549505 GSTCDQ8NEC7 633 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 ZNF668Q96K58 619 aaPredicted RBP10.48□□□□□ -0.73
RAB5B-206ENST00000549505 HINFPQ9BQA5 517 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 METTL5Q9NRN9 209 aaKnown RBP10.48□□□□□ -0.73
RAB5B-206ENST00000549505 TJP2Q9UDY2 1190 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 SF3B1O75533 1304 aaKnown RBP eCLIP10.48□□□□□ -0.732e-7■■■■■ 66.8
RAB5B-206ENST00000549505 XPO1O14980 1071 aaKnown RBP10.48□□□□□ -0.73
RAB5B-206ENST00000549505 GJB6O95452 261 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 GOLGA7BQ2TAP0 167 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 CCDC14Q49A88 953 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 CEP85LQ5SZL2 805 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 RNASEH2BQ5TBB1 312 aaKnown RBP10.48□□□□□ -0.73
RAB5B-206ENST00000549505 C4orf22Q6V702 233 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 BEND5Q7L4P6 421 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 TMEM86AQ8N2M4 240 aa10.48□□□□□ -0.73
RAB5B-206ENST00000549505 C5orf60A6NFR6 353 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 C9IYK1 514 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 PPEF2O14830 753 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 SPTLC1O15269 473 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 CYP11A1P05108 521 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 ATF2P15336 505 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 CD19P15391 556 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 TGM2P21980 687 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 MIPP30301 263 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 MDH1P40925 334 aaKnown RBP10.47□□□□□ -0.73
RAB5B-206ENST00000549505 KCNJ1P48048 391 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 RAB27AP51159 221 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 PLCB3Q01970 1234 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 ZNF394Q53GI3 561 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 DENND2CQ68D51 928 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 STRADAQ7RTN6 431 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 ADAT2Q7Z6V5 191 aaKnown RBP10.47□□□□□ -0.73
RAB5B-206ENST00000549505 SLC43A3Q8NBI5 491 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 C18orf25Q96B23 403 aaPredicted RBP10.47□□□□□ -0.73
RAB5B-206ENST00000549505 ZNF670Q9BS34 389 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 DDX23Q9BUQ8 820 aaKnown RBP10.47□□□□□ -0.73
RAB5B-206ENST00000549505 SEZ6LQ9BYH1 1024 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 STMN4Q9H169 189 aaPredicted RBP10.47□□□□□ -0.73
RAB5B-206ENST00000549505 USP18Q9UMW8 372 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 GOLGA6L10A6NI86 522 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 TNPO2O14787 897 aaKnown RBP10.47□□□□□ -0.73
RAB5B-206ENST00000549505 CABYRO75952 493 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 MYL3P08590 195 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 FGFR1P11362 822 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 IL4RP24394 825 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 ITGA8P53708 1063 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 AIF1P55008 147 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 NOMO1Q15155 1222 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 PPP1R7Q15435 360 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 PMF1Q6P1K2 205 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 C7orf31Q8N865 590 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 ARRDC4Q8NCT1 418 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 TRIB2Q92519 343 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 TTC25Q96NG3 672 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 PEBP4Q96S96 227 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 SEMA4AQ9H3S1 761 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 SCN1AP35498 2009 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 ALOX15BO15296 676 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 PAPSS1O43252 624 aaPredicted RBP10.47□□□□□ -0.73
RAB5B-206ENST00000549505 FGFR4P22455 802 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 LILRA4P59901 499 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 PPP2R2AP63151 447 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 SOX4Q06945 474 aaPredicted RBP10.47□□□□□ -0.73
RAB5B-206ENST00000549505 XRCC4Q13426 336 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 DPYSL2Q16555 572 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 ATP13A4Q4VNC1 1196 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 RAB41Q5JT25 222 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 RSPH3Q86UC2 560 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 SLC2A13Q96QE2 648 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 FRMD8Q9BZ67 464 aaPredicted RBP10.47□□□□□ -0.73
RAB5B-206ENST00000549505 DNPEPQ9ULA0 475 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 ATP8A1Q9Y2Q0 1164 aa10.47□□□□□ -0.73
RAB5B-206ENST00000549505 E5RJQ4 531 aa10.46□□□□□ -0.73
RAB5B-206ENST00000549505 CHRNA1P02708 482 aa10.46□□□□□ -0.73
RAB5B-206ENST00000549505 CAPN2P17655 700 aa10.46□□□□□ -0.73
RAB5B-206ENST00000549505 STIP1P31948 543 aaKnown RBP10.46□□□□□ -0.73
RAB5B-206ENST00000549505 PTK7Q13308 1070 aa10.46□□□□□ -0.73
RAB5B-206ENST00000549505 SPATS2Q86XZ4 545 aaKnown RBP10.46□□□□□ -0.73
RAB5B-206ENST00000549505 UBLCP1Q8WVY7 318 aaPredicted RBP10.46□□□□□ -0.73
RAB5B-206ENST00000549505 ATG4AQ8WYN0 398 aa10.46□□□□□ -0.73
RAB5B-206ENST00000549505 PGAP3Q96FM1 320 aaPredicted RBP10.46□□□□□ -0.73
RAB5B-206ENST00000549505 TNIP3Q96KP6 325 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms