RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 BSNDQ8WZ55 320 aa12.19□□□□□ -0.46
VDR-206ENST00000549336 FNDC3AQ9Y2H6 1198 aaKnown RBP12.19□□□□□ -0.46
VDR-206ENST00000549336 BAZ2AQ9UIF9 1905 aaKnown RBP12.19□□□□□ -0.46
VDR-206ENST00000549336 GOLGA8KD6RF30 607 aa12.19□□□□□ -0.46
VDR-206ENST00000549336 PI4K2BG5E9Z4 385 aa12.19□□□□□ -0.46
VDR-206ENST00000549336 KRT37O76014 449 aa12.19□□□□□ -0.46
VDR-206ENST00000549336 LBX1P52954 281 aa12.19□□□□□ -0.46
VDR-206ENST00000549336 SP2Q02086 613 aa12.19□□□□□ -0.46
VDR-206ENST00000549336 DENND5BQ6ZUT9 1274 aa12.19□□□□□ -0.46
VDR-206ENST00000549336 ARHGEF26Q96DR7 871 aa12.19□□□□□ -0.46
VDR-206ENST00000549336 NFKBIZQ9BYH8 718 aa12.19□□□□□ -0.46
VDR-206ENST00000549336 AVENQ9NQS1 362 aaPredicted RBP12.19□□□□□ -0.46
VDR-206ENST00000549336 A0A1W2PQ45 241 aaPredicted RBP12.18□□□□□ -0.46
VDR-206ENST00000549336 A0A1W2PQY0 241 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 MICAL2O94851 1124 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 FGF19O95750 216 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 GPS1Q13098 491 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 CCDC62Q6P9F0 684 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 CNKSR3Q6P9H4 555 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 OTOP2Q7RTS6 562 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 ARHGEF19Q8IW93 802 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 TRIM42Q8IWZ5 723 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 B3GALNT2Q8NCR0 500 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 FAM172AQ8WUF8 416 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 SCG3Q8WXD2 468 aaKnown RBP12.18□□□□□ -0.46
VDR-206ENST00000549336 PGLYRP2Q96PD5 576 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 WDR70Q9NW82 654 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 SQORQ9Y6N5 450 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 BUB1BO60566 1050 aaPredicted RBP12.18□□□□□ -0.46
VDR-206ENST00000549336 ITGBL1O95965 494 aaPredicted RBP12.18□□□□□ -0.46
VDR-206ENST00000549336 NPR3P17342 541 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 BDNFP23560 247 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 RRM1P23921 792 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 GJA5P36382 358 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 PRAMEP78395 509 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 CBX1P83916 185 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 ADIGQ0VDE8 80 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 C9orf57Q5W0N0 161 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 MED4Q9NPJ6 270 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 ABCC13Q9NSE7 274 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.18□□□□□ -0.46
VDR-206ENST00000549336 ZNF197O14709 1029 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 NCK2O43639 380 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 PROSCO94903 275 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 CENPCQ03188 943 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 SPIRE1Q08AE8 756 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 MORN1Q5T089 497 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 TAPT1Q6NXT6 567 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 KLC3Q6P597 504 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 RXFP2Q8WXD0 754 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 PAWRQ96IZ0 340 aaKnown RBP12.18□□□□□ -0.46
VDR-206ENST00000549336 GDAP1L1Q96MZ0 367 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 PAK5Q9P286 719 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 SNX24Q9Y343 169 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 IQANK1A0A1B0GTG1 560 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 EXOC1LA0A1B0GW35 172 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 TTLL13PA6NNM8 815 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 SYN3O14994 580 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 SH3BP5O60239 455 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 CST8O60676 142 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 STIP1P31948 543 aaKnown RBP12.18□□□□□ -0.46
VDR-206ENST00000549336 COPS2P61201 443 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 ZNF200P98182 395 aaPredicted RBP12.18□□□□□ -0.46
VDR-206ENST00000549336 POLD3Q15054 466 aaPredicted RBP12.18□□□□□ -0.46
VDR-206ENST00000549336 NUGGCQ68CJ6 796 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 TIGD7Q6NT04 549 aaPredicted RBP12.18□□□□□ -0.46
VDR-206ENST00000549336 DDX42Q86XP3 938 aaKnown RBP eCLIP12.18□□□□□ -0.46
VDR-206ENST00000549336 MCOLN2Q8IZK6 566 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 CEP120Q8N960 986 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 SNF8Q96H20 258 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 ASAH2Q9NR71 780 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 RSPH14Q9UHP6 348 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 MYH13Q9UKX3 1938 aa12.18□□□□□ -0.46
VDR-206ENST00000549336 FRMD3A2A2Y4 597 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 KCNN4O15554 427 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 KRT38O76015 456 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 CXCL14O95715 111 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 CKBP12277 381 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 TBX4P57082 545 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 FAM187BQ17R55 369 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 ZNF571Q7Z3V5 609 aaPredicted RBP12.17□□□□□ -0.46
VDR-206ENST00000549336 ANKRD52Q8NB46 1076 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 TPCN2Q8NHX9 752 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 SPATA18Q8TC71 538 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 DEPDC1BQ8WUY9 529 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 FRMD8Q9BZ67 464 aaPredicted RBP12.17□□□□□ -0.46
VDR-206ENST00000549336 FOXP3Q9BZS1 431 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 UBE2OQ9C0C9 1292 aaKnown RBP12.17□□□□□ -0.46
VDR-206ENST00000549336 PACSIN2Q9UNF0 486 aaPredicted RBP12.17□□□□□ -0.46
VDR-206ENST00000549336 ANGPTL3Q9Y5C1 460 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 OPLAHO14841 1288 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 NCAM2O15394 837 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 ATMINO43313 823 aaPredicted RBP12.17□□□□□ -0.46
VDR-206ENST00000549336 ATP8B1O43520 1251 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 GLUD1P00367 558 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 LTFP02788 710 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 PRKCIP41743 596 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 ACBD5Q5T8D3 534 aaPredicted RBP12.17□□□□□ -0.46
VDR-206ENST00000549336 PGBD3Q8N328 593 aa12.17□□□□□ -0.46
VDR-206ENST00000549336 OR5B17Q8NGF7 314 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms