RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 SEPT5Q99719 369 aaPredicted RBP10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 SYNCQ9H7C4 482 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 SFXN1Q9H9B4 322 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 LRRC4Q9HBW1 653 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 LCMT1Q9UIC8 334 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 ATG2AQ2TAZ0 1938 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 PLXNA3P51805 1871 aa10.32□□□□□ -0.76
SMARCD1-206ENST00000549274 MYO7AQ13402 2215 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 HIDE1A8MVS5 230 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 RTN2O75298 545 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 CALB1P05937 261 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 C8AP07357 584 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 MMEP08473 750 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 PNMA6AP0CW24 399 aaPredicted RBP10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 RPL17P18621 184 aaKnown RBP10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 IRS1P35568 1242 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 SCNN1AP37088 669 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 NRIP1P48552 1158 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 PSEN1P49768 467 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 FMO1Q01740 532 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 CENPCQ03188 943 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 DUSP4Q13115 394 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 ORC1Q13415 861 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 PTPN21Q16825 1174 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 PABPC1LQ4VXU2 614 aaKnown RBP10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 PKDCCQ504Y2 493 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 TMEM184AQ6ZMB5 413 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 TOGARAM2Q6ZUX3 1019 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 LRRTM3Q86VH5 581 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 ERICH1Q86X53 443 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 PALB2Q86YC2 1186 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 GLYCTKQ8IVS8 523 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 SCN4BQ8IWT1 228 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 NUP93Q8N1F7 819 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 SIX6OS1Q8N1H7 587 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 CMASQ8NFW8 434 aaPredicted RBP10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 SLC22A17Q8WUG5 538 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 OVCA2Q8WZ82 227 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 TFAP2BQ92481 460 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 PGLYRP2Q96PD5 576 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 GCNAQ96QF7 691 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 TMEM209Q96SK2 561 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 CDK5RAP1Q96SZ6 601 aaKnown RBP10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 TTYH1Q9H313 450 aaPredicted RBP10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 PRDM12Q9H4Q4 367 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 NHEJ1Q9H9Q4 299 aaPredicted RBP10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 CNGB3Q9NQW8 809 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 MAN1C1Q9NR34 630 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 INTUQ9ULD6 942 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 YIPF1Q9Y548 306 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 NME7Q9Y5B8 376 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 INSL5Q9Y5Q6 135 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 HCFC2Q9Y5Z7 792 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 CLUHO75153 1309 aa10.31□□□□□ -0.76
SMARCD1-206ENST00000549274 ANKRD62A6NC57 917 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 EPOPA6NHQ4 379 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 EIF3CLB5ME19 914 aaKnown RBP10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 RBAK-RBAKDNI3L0D1 243 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 CLDN5O00501 218 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 ZNF197O14709 1029 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 CCP110O43303 1012 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 PAPLNO95428 1278 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 CYP1A1P04798 512 aaPredicted RBP10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 GLI1P08151 1106 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 OR4Q2P0C623 313 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 PFKLP17858 780 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 CYP2F1P24903 491 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 EIF4A3P38919 411 aaKnown RBP10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 GPD2P43304 727 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 KIF11P52732 1056 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 GSCP56915 257 aaPredicted RBP10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 MAP3K7CLP57077 242 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 NOMO3P69849 1222 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 PDE4CQ08493 712 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 GRIN2CQ14957 1233 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 CLEC16AQ2KHT3 1053 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 TAF3Q5VWG9 929 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 HGSNATQ68CP4 663 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 ACAD10Q6JQN1 1059 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 ALKBH5Q6P6C2 394 aaKnown RBP10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 WDR59Q6PJI9 974 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 RSPO2Q6UXX9 243 aaPredicted RBP10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 CLEC20AQ6ZU45 233 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 DENND5BQ6ZUT9 1274 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 ZNF571Q7Z3V5 609 aaPredicted RBP10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 SPRED2Q7Z698 418 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 TADA2BQ86TJ2 420 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 TTC30AQ86WT1 665 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 PHF13Q86YI8 300 aaPredicted RBP10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 LRRC8AQ8IWT6 810 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 ATAD1Q8NBU5 361 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 SLC7A14Q8TBB6 771 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 SLC35F5Q8WV83 523 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 IRGQQ8WZA9 623 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 SECISBP2LQ93073 1101 aaKnown RBP10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 PSMG2Q969U7 264 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 TRMT2BQ96GJ1 504 aaKnown RBP10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 PPP1R13BQ96KQ4 1090 aa10.3□□□□□ -0.76
SMARCD1-206ENST00000549274 ZNF512Q96ME7 567 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms