RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 KMT5AQ9NQR1 393 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 GPR27Q9NS67 375 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 MARCH5Q9NX47 278 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 ZDHHC7Q9NXF8 308 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 ARMCX3Q9UH62 379 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-212ENST00000549162 GJA3Q9Y6H8 435 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 TMEM191CA6NGB0 347 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 AP3B1O00203 1094 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 CDK2AP1O14519 115 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 ZNF263O14978 683 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 FOXN1O15353 648 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 TMEM191BP0C7N4 346 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 MLNP12872 115 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 BDNFP23560 247 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 SLC25A11Q02978 314 aaKnown RBP5.19□□□□□ -1.58
SCAF11-212ENST00000549162 CAV1Q03135 178 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 TUSC3Q13454 348 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 GDF6Q6KF10 455 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-212ENST00000549162 GALNT13Q8IUC8 556 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 FAM178BQ8IXR5 827 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 LRRC43Q8N309 656 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 ANKRD20A12PQ8NF67 263 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 LNX1Q8TBB1 728 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-212ENST00000549162 CCHCR1Q8TD31 782 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 EPS8L3Q8TE67 593 aaKnown RBP5.19□□□□□ -1.58
SCAF11-212ENST00000549162 NELL1Q92832 810 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 NXPE3Q969Y0 559 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 THAP11Q96EK4 314 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 TCEANC2Q96MN5 208 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 C2orf49Q9BVC5 232 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-212ENST00000549162 BHMT2Q9H2M3 363 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 KIF9Q9HAQ2 790 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 DZANK1Q9NVP4 752 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-212ENST00000549162 FAM187AA6NFU0 413 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 WASH3PC4AMC7 463 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 P4HA1P13674 534 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 H2AFXP16104 143 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-212ENST00000549162 ARF4P18085 180 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-212ENST00000549162 GRK4P32298 578 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 PPM1AP35813 382 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 GPD2P43304 727 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 APBA1Q02410 837 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 PPP3CAQ08209 521 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 NSUN2Q08J23 767 aaKnown RBP eCLIP5.19□□□□□ -1.58
SCAF11-212ENST00000549162 TRIP4Q15650 581 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-212ENST00000549162 CTC1Q2NKJ3 1217 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 PRSS36Q5K4E3 855 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 FAM91A1Q658Y4 838 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 IQCEQ6IPM2 695 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 CYFIP1Q7L576 1253 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 THNSL1Q8IYQ7 743 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 SH3GL2Q99962 352 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 PCED1AQ9H1Q7 454 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 EFCC1Q9HA90 598 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 AGO2Q9UKV8 859 aaKnown RBP5.19□□□□□ -1.58
SCAF11-212ENST00000549162 TSC22D4Q9Y3Q8 395 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 NME7Q9Y5B8 376 aa5.19□□□□□ -1.58
SCAF11-212ENST00000549162 ALOX15BO15296 676 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 IRAK2O43187 625 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 TBCAO75347 108 aaKnown RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 USP17L7P0C7H9 530 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 NR2C2P49116 596 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 ST13P50502 369 aaKnown RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 RBM5P52756 815 aaKnown RBP eCLIP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 PPIGQ13427 754 aaKnown RBP eCLIP5.18□□□□□ -1.582e-7■□□□□ 9.1
SCAF11-212ENST00000549162 SLC12A1Q13621 1099 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 RFTN1Q14699 578 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 DUOXA2Q1HG44 320 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 PEAR1Q5VY43 1037 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 OLFML1Q6UWY5 402 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 RUFY4Q6ZNE9 571 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 GADL1Q6ZQY3 521 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 RTN4RL1Q86UN2 441 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 WDTC1Q8N5D0 677 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 ANKRD52Q8NB46 1076 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 EXD1Q8NHP7 514 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 EAF1Q96JC9 268 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 ZNF670Q9BS34 389 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 SMOC2Q9H3U7 446 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 AZI2Q9H6S1 392 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 PRDM5Q9NQX1 630 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 OLA1Q9NTK5 396 aaKnown RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 HBS1LQ9Y450 684 aaKnown RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 JRKLQ9Y4A0 524 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 ACTL7BQ9Y614 415 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 H7C4K7 107 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 MPHOSPH10O00566 681 aaKnown RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 C1QAP02745 245 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 LAG3P18627 525 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 GLUD2P49448 558 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 PPFIA1Q13136 1202 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 STK3Q13188 491 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 PLS1Q14651 629 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 PDK2Q15119 407 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 SH2D4BQ5SQS7 431 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 RGS9BPQ6ZS82 235 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 C1orf127Q8N9H9 656 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 NOA1Q8NC60 698 aaKnown RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 MCUQ8NE86 351 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms