RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 ITKQ08881 620 aa14.8□□□□□ -0.04
CACNB3-209ENST00000548860 DPY19L2P1Q6NXN4 242 aa14.8□□□□□ -0.04
CACNB3-209ENST00000548860 PID1Q7Z2X4 250 aa14.8□□□□□ -0.04
CACNB3-209ENST00000548860 PPIL6Q8IXY8 311 aa14.8□□□□□ -0.04
CACNB3-209ENST00000548860 SLC26A7Q8TE54 656 aa14.8□□□□□ -0.04
CACNB3-209ENST00000548860 CPXM1Q96SM3 734 aa14.8□□□□□ -0.04
CACNB3-209ENST00000548860 KLC2Q9H0B6 622 aa14.8□□□□□ -0.04
CACNB3-209ENST00000548860 HMGXB4Q9UGU5 601 aa14.8□□□□□ -0.04
CACNB3-209ENST00000548860 LRP5O75197 1615 aa14.8□□□□□ -0.04
CACNB3-209ENST00000548860 PRRC2BQ5JSZ5 2229 aaKnown RBP14.8□□□□□ -0.04
CACNB3-209ENST00000548860 ZMPSTE24O75844 475 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 TCN1P20061 433 aaPredicted RBP14.79□□□□□ -0.04
CACNB3-209ENST00000548860 DRG2P55039 364 aaKnown RBP14.79□□□□□ -0.04
CACNB3-209ENST00000548860 GOLGA7BQ2TAP0 167 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 GRAMD1BQ3KR37 738 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 EXT2Q93063 718 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 SGF29Q96ES7 293 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 DLGAP2Q9P1A6 1054 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 BCORQ6W2J9 1755 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 DOCK2Q92608 1830 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 NHSL1Q5SYE7 1610 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 A0A1B0GUL6 1792 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 RASSF9O75901 435 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 KCNA4P22459 653 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 AKAP5P24588 427 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 NAMPTP43490 491 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 R3HDM1Q15032 1099 aaKnown RBP14.79□□□□□ -0.04
CACNB3-209ENST00000548860 NFIL3Q16649 462 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 TREML2Q5T2D2 321 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 RGS9BPQ6ZS82 235 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 CCHCR1Q8TD31 782 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 PGBD4Q96DM1 585 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 TBC1D10AQ9BXI6 508 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 ADAM7Q9H2U9 754 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 KLHL8Q9P2G9 620 aaPredicted RBP14.79□□□□□ -0.04
CACNB3-209ENST00000548860 TOP3BO95985 862 aaKnown RBP14.79□□□□□ -0.04
CACNB3-209ENST00000548860 STAG3L1P0CL83 205 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 ACAT1P24752 427 aaKnown RBP14.79□□□□□ -0.04
CACNB3-209ENST00000548860 ATXN1P54253 815 aaKnown RBP14.79□□□□□ -0.04
CACNB3-209ENST00000548860 RPL10AP62906 217 aaKnown RBP14.79□□□□□ -0.04
CACNB3-209ENST00000548860 KLHL38Q2WGJ6 581 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 TMEM63BQ5T3F8 832 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 RWDD4Q6NW29 188 aaKnown RBP14.79□□□□□ -0.04
CACNB3-209ENST00000548860 FOXR2Q6PJQ5 311 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 TTC7BQ86TV6 843 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 CRLF3Q8IUI8 442 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 RNF148Q8N7C7 305 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 MFSD14AQ96MC6 490 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 DDX50Q9BQ39 737 aaKnown RBP14.79□□□□□ -0.04
CACNB3-209ENST00000548860 SLC17A6Q9P2U8 582 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 TIMM13Q9Y5L4 95 aaPredicted RBP14.79□□□□□ -0.04
CACNB3-209ENST00000548860 COMMD10Q9Y6G5 202 aa14.79□□□□□ -0.04
CACNB3-209ENST00000548860 ADM5C9JUS6 153 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 KCNK1O00180 336 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 TRPA1O75762 1119 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 HMGCRP04035 888 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 NDST1P52848 882 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 HEATR6Q6AI08 1181 aaKnown RBP14.78□□□□□ -0.04
CACNB3-209ENST00000548860 C6orf89Q6UWU4 347 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 OTOAQ7RTW8 1153 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 FAM172AQ8WUF8 416 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 ATP2A3Q93084 1043 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 FAM136AQ96C01 138 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 TMEM120AQ9BXJ8 343 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 SNX25Q9H3E2 840 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 STRIP2Q9ULQ0 834 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 LACTBL1A8MY62 500 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 C4BPAP04003 597 aaKnown RBP14.78□□□□□ -0.04
CACNB3-209ENST00000548860 ARL4AP40617 200 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 MMP14P50281 582 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 MYBPC2Q14324 1141 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 YTHDF3Q7Z739 585 aaKnown RBP14.78□□□□□ -0.04
CACNB3-209ENST00000548860 TRPM4Q8TD43 1214 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 KCNG1Q9UIX4 513 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 CCDC88AQ3V6T2 1871 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 GOLGA8QA0A0J9YX86 632 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 GOLGA8OA6NCC3 632 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 GOLGA8NF8WBI6 632 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 ADCY3O60266 1144 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 KCNA2P16389 499 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 OSBPP22059 807 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 TYK2P29597 1187 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 SLC8A3P57103 927 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 PLCB4Q15147 1175 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 DCAF6Q58WW2 860 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 ANKRD20A2Q5SQ80 823 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 ANKRD20A1Q5TYW2 823 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 JADE1Q6IE81 842 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 ZC3H3Q8IXZ2 948 aaKnown RBP14.78□□□□□ -0.04
CACNB3-209ENST00000548860 CCNYL1Q8N7R7 359 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 CLPTM1LQ96KA5 538 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 LRRC4Q9HBW1 653 aa14.78□□□□□ -0.04
CACNB3-209ENST00000548860 TSR3Q9UJK0 312 aaKnown RBP14.78□□□□□ -0.04
CACNB3-209ENST00000548860 DDNO94850 711 aaPredicted RBP14.77□□□□□ -0.04
CACNB3-209ENST00000548860 UNGP13051 313 aaPredicted RBP14.77□□□□□ -0.04
CACNB3-209ENST00000548860 HMGB2P26583 209 aaKnown RBP14.77□□□□□ -0.04
CACNB3-209ENST00000548860 TFDP2Q14188 446 aa14.77□□□□□ -0.04
CACNB3-209ENST00000548860 PRPF39Q86UA1 669 aaKnown RBP14.77□□□□□ -0.04
CACNB3-209ENST00000548860 RYBPQ8N488 228 aaPredicted RBP14.77□□□□□ -0.04
CACNB3-209ENST00000548860 AGBL3Q8NEM8 1001 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms