RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 TAP1Q03518 808 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 CDC16Q13042 620 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 MTM1Q13496 603 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 TBCCQ15814 346 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 FBXO27Q8NI29 283 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 ZNF606Q8WXB4 792 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 TDRD3Q9H7E2 651 aaKnown RBP24.15■■□□□ 1.46
NPAS3-206ENST00000548645 C10orf88Q9H8K7 445 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 SLC7A8Q9UHI5 535 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 SERPINA10Q9UK55 444 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 TCRBV7S3A2A0A539 114 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 VNN1O95497 513 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 RTP1P59025 263 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 MRPS9P82933 396 aaKnown RBP24.15■■□□□ 1.46
NPAS3-206ENST00000548645 KDSRQ06136 332 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 TMCO4Q5TGY1 634 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 ATG16L1Q676U5 607 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 ST13P4Q8IZP2 240 aaPredicted RBP24.15■■□□□ 1.46
NPAS3-206ENST00000548645 TAB3Q8N5C8 712 aaPredicted RBP24.15■■□□□ 1.46
NPAS3-206ENST00000548645 MTBPQ96DY7 904 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 SRPK1Q96SB4 655 aaKnown RBP24.15■■□□□ 1.46
NPAS3-206ENST00000548645 HERC5Q9UII4 1024 aaKnown RBP24.15■■□□□ 1.46
NPAS3-206ENST00000548645 CCPG1Q9ULG6 757 aa24.15■■□□□ 1.46
NPAS3-206ENST00000548645 SFNP31947 248 aa24.14■■□□□ 1.46
NPAS3-206ENST00000548645 KBTBD12Q3ZCT8 623 aa24.14■■□□□ 1.46
NPAS3-206ENST00000548645 STRIP1Q5VSL9 837 aa24.14■■□□□ 1.46
NPAS3-206ENST00000548645 SLX4Q8IY92 1834 aa24.14■■□□□ 1.46
NPAS3-206ENST00000548645 MYH9P35579 1960 aaKnown RBP24.14■■□□□ 1.46
NPAS3-206ENST00000548645 TCRBV9S1A1TA0A576 114 aa24.14■■□□□ 1.45
NPAS3-206ENST00000548645 FKBP1AP62942 108 aaKnown RBP24.14■■□□□ 1.45
NPAS3-206ENST00000548645 LRRC23Q53EV4 343 aaPredicted RBP24.14■■□□□ 1.45
NPAS3-206ENST00000548645 ANO5Q75V66 913 aa24.14■■□□□ 1.45
NPAS3-206ENST00000548645 POLNQ7Z5Q5 900 aa24.14■■□□□ 1.45
NPAS3-206ENST00000548645 FEM1BQ9UK73 627 aa24.14■■□□□ 1.45
NPAS3-206ENST00000548645 TCRBV5S1A1TA0A578 114 aa24.14■■□□□ 1.45
NPAS3-206ENST00000548645 CST8O60676 142 aa24.14■■□□□ 1.45
NPAS3-206ENST00000548645 ELK3P41970 407 aa24.14■■□□□ 1.45
NPAS3-206ENST00000548645 NIPA2Q8N8Q9 360 aa24.14■■□□□ 1.45
NPAS3-206ENST00000548645 CLPTM1LQ96KA5 538 aa24.14■■□□□ 1.45
NPAS3-206ENST00000548645 AGBL1Q96MI9 1066 aa24.14■■□□□ 1.45
NPAS3-206ENST00000548645 FBXO28Q9NVF7 368 aa24.14■■□□□ 1.45
NPAS3-206ENST00000548645 TRPC5Q9UL62 973 aaPredicted RBP24.14■■□□□ 1.45
NPAS3-206ENST00000548645 COMMD3-BMI1R4GMX3 469 aa24.14■■□□□ 1.45
NPAS3-206ENST00000548645 POLRMTO00411 1230 aaKnown RBP24.13■■□□□ 1.45
NPAS3-206ENST00000548645 SPAG6O75602 509 aa24.13■■□□□ 1.45
NPAS3-206ENST00000548645 ATP5BP06576 529 aaKnown RBP24.13■■□□□ 1.45
NPAS3-206ENST00000548645 SH3BGRP55822 239 aaPredicted RBP24.13■■□□□ 1.45
NPAS3-206ENST00000548645 SOX10P56693 466 aa24.13■■□□□ 1.45
NPAS3-206ENST00000548645 TMPRSS15P98073 1019 aa24.13■■□□□ 1.45
NPAS3-206ENST00000548645 KYAT3Q6YP21 454 aaKnown RBP24.13■■□□□ 1.45
NPAS3-206ENST00000548645 BBS12Q6ZW61 710 aa24.13■■□□□ 1.45
NPAS3-206ENST00000548645 PRPF39Q86UA1 669 aaKnown RBP24.13■■□□□ 1.45
NPAS3-206ENST00000548645 ARID3BQ8IVW6 561 aaPredicted RBP24.13■■□□□ 1.45
NPAS3-206ENST00000548645 NDNQ99608 321 aa24.13■■□□□ 1.45
NPAS3-206ENST00000548645 PPME1Q9Y570 386 aa24.13■■□□□ 1.45
NPAS3-206ENST00000548645 LIG4P49917 911 aa24.13■■□□□ 1.45
NPAS3-206ENST00000548645 BASP1P80723 227 aaKnown RBP24.13■■□□□ 1.45
NPAS3-206ENST00000548645 CDK18Q07002 472 aa24.13■■□□□ 1.45
NPAS3-206ENST00000548645 MDH1BQ5I0G3 518 aa24.13■■□□□ 1.45
NPAS3-206ENST00000548645 MARK2Q7KZI7 788 aaKnown RBP24.13■■□□□ 1.45
NPAS3-206ENST00000548645 ADGRG6Q86SQ4 1221 aa24.13■■□□□ 1.45
NPAS3-206ENST00000548645 C1orf21Q9H246 121 aa24.13■■□□□ 1.45
NPAS3-206ENST00000548645 LY75O60449 1722 aa24.13■■□□□ 1.45
NPAS3-206ENST00000548645 C3orf70A6NLC5 250 aaPredicted RBP24.12■■□□□ 1.45
NPAS3-206ENST00000548645 BST1Q10588 318 aa24.12■■□□□ 1.45
NPAS3-206ENST00000548645 HNRNPDQ14103 355 aaKnown RBP24.12■■□□□ 1.45
NPAS3-206ENST00000548645 ZYXQ15942 572 aaKnown RBP24.12■■□□□ 1.45
NPAS3-206ENST00000548645 DACT2Q5SW24 774 aa24.12■■□□□ 1.45
NPAS3-206ENST00000548645 TTC39BQ5VTQ0 682 aaPredicted RBP24.12■■□□□ 1.45
NPAS3-206ENST00000548645 AAGABQ6PD74 315 aa24.12■■□□□ 1.45
NPAS3-206ENST00000548645 ACAD11Q709F0 780 aa24.12■■□□□ 1.45
NPAS3-206ENST00000548645 E2F7Q96AV8 911 aa24.12■■□□□ 1.45
NPAS3-206ENST00000548645 CEP170P1Q96L14 293 aa24.12■■□□□ 1.45
NPAS3-206ENST00000548645 PPM1HQ9ULR3 514 aa24.12■■□□□ 1.45
NPAS3-206ENST00000548645 RGPD3A6NKT7 1758 aaPredicted RBP24.12■■□□□ 1.45
NPAS3-206ENST00000548645 RGPD4Q7Z3J3 1758 aa24.12■■□□□ 1.45
NPAS3-206ENST00000548645 LSM8O95777 96 aaKnown RBP24.12■■□□□ 1.45
NPAS3-206ENST00000548645 YWHAGP61981 247 aaKnown RBP eCLIP24.12■■□□□ 1.45
NPAS3-206ENST00000548645 KRT76Q01546 638 aa24.12■■□□□ 1.45
NPAS3-206ENST00000548645 IGDCC3Q8IVU1 814 aa24.12■■□□□ 1.45
NPAS3-206ENST00000548645 ACAP3Q96P50 834 aa24.12■■□□□ 1.45
NPAS3-206ENST00000548645 KBTBD13C9JR72 458 aa24.11■■□□□ 1.45
NPAS3-206ENST00000548645 PDLIM1O00151 329 aa24.11■■□□□ 1.45
NPAS3-206ENST00000548645 NFIBO00712 420 aa24.11■■□□□ 1.45
NPAS3-206ENST00000548645 CCNE2O96020 404 aa24.11■■□□□ 1.45
NPAS3-206ENST00000548645 ICAM1P05362 532 aa24.11■■□□□ 1.45
NPAS3-206ENST00000548645 ERFP50548 548 aa24.11■■□□□ 1.45
NPAS3-206ENST00000548645 HSF5Q4G112 596 aaPredicted RBP24.11■■□□□ 1.45
NPAS3-206ENST00000548645 CFAP157Q5JU67 520 aa24.11■■□□□ 1.45
NPAS3-206ENST00000548645 SLC26A11Q86WA9 606 aa24.11■■□□□ 1.45
NPAS3-206ENST00000548645 MCF2L2Q86YR7 1114 aa24.11■■□□□ 1.45
NPAS3-206ENST00000548645 FAM81AQ8TBF8 368 aa24.11■■□□□ 1.45
NPAS3-206ENST00000548645 OPTNQ96CV9 577 aa24.11■■□□□ 1.45
NPAS3-206ENST00000548645 HAPLN3Q96S86 360 aa24.11■■□□□ 1.45
NPAS3-206ENST00000548645 WNT7BP56706 349 aa24.11■■□□□ 1.45
NPAS3-206ENST00000548645 SDCCAG8Q86SQ7 713 aaPredicted RBP24.11■■□□□ 1.45
NPAS3-206ENST00000548645 UNC45BQ8IWX7 931 aa24.11■■□□□ 1.45
NPAS3-206ENST00000548645 IRAK4Q9NWZ3 460 aa24.11■■□□□ 1.45
NPAS3-206ENST00000548645 NUB1Q9Y5A7 615 aa24.11■■□□□ 1.45
NPAS3-206ENST00000548645 PTPRJQ12913 1337 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms