RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 ERICH3Q5RHP9 1530 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 ERCC6L2Q5T890 1561 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 A0A0B4J269 797 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 OR2W5A6NFC9 320 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 hCG_1984214I3L0E3 225 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 SYT5O00445 386 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 PODXLO00592 558 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 CD3EAPO15446 510 aaKnown RBP4.86□□□□□ -1.63
PTCH1-216ENST00000548379 FOXD2O60548 495 aaPredicted RBP4.86□□□□□ -1.63
PTCH1-216ENST00000548379 SKAP2O75563 359 aaPredicted RBP4.86□□□□□ -1.63
PTCH1-216ENST00000548379 CDKL5O76039 1030 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 VEGFAP15692 232 aaPredicted RBP4.86□□□□□ -1.63
PTCH1-216ENST00000548379 ZNF20P17024 532 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 GATA3P23771 443 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 SLC5A2P31639 672 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 CHKAP35790 457 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 CTSWP56202 376 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 SATB1Q01826 763 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 KRT17Q04695 432 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 FPGSQ05932 587 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 FOXO1Q12778 655 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 TUBB3Q13509 450 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 PTK2BQ14289 1009 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 MAPKAPK3Q16644 382 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 PFKFB4Q16877 469 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 SLC5A9Q2M3M2 681 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 PTCHD3Q3KNS1 767 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 RBM20Q5T481 1227 aaKnown RBP4.86□□□□□ -1.63
PTCH1-216ENST00000548379 VPS53Q5VIR6 699 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 MANEALQ5VSG8 457 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 ARL6IP4Q66PJ3 421 aaKnown RBP4.86□□□□□ -1.63
PTCH1-216ENST00000548379 CRTC1Q6UUV9 634 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 ZNF276Q8N554 614 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 CPEB3Q8NE35 698 aaKnown RBP4.86□□□□□ -1.63
PTCH1-216ENST00000548379 CACTINQ8WUQ7 758 aaKnown RBP4.86□□□□□ -1.63
PTCH1-216ENST00000548379 SNX19Q92543 992 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 RNF31Q96EP0 1072 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 FAM227BQ96M60 508 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 CDK5RAP1Q96SZ6 601 aaKnown RBP4.86□□□□□ -1.63
PTCH1-216ENST00000548379 RMDN3Q96TC7 470 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 ALOXE3Q9BYJ1 711 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 INTS13Q9NVM9 706 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 PARPBPQ9NWS1 579 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 IGSF9Q9P2J2 1179 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 VPS51Q9UID3 782 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 MRPS17Q9Y2R5 130 aaKnown RBP4.86□□□□□ -1.63
PTCH1-216ENST00000548379 NOX1Q9Y5S8 564 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 HS3ST4Q9Y661 456 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 MORC2Q9Y6X9 1032 aaPredicted RBP4.86□□□□□ -1.63
PTCH1-216ENST00000548379 PTPRGP23470 1445 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 ADAMTS12P58397 1594 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 ABCA5Q8WWZ7 1642 aa4.86□□□□□ -1.63
PTCH1-216ENST00000548379 hCG_1642624A0A1W2PR95 340 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 LGALS16A8MUM7 142 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 TRIAP1O43715 76 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 TLR5O60602 858 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 PIAS2O75928 621 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 NDUFA10O95299 355 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 ITGA5P08648 1049 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 SRGNP10124 158 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 DDX6P26196 483 aaKnown RBP eCLIP4.85□□□□□ -1.63
PTCH1-216ENST00000548379 MST1P26927 711 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 CD6P30203 668 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 SERPINF1P36955 418 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 ADAM17P78536 824 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 FZD5Q13467 585 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 E2F2Q14209 437 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 SPARCL1Q14515 664 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 SPDYE7PQ495Y7 208 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 CCDC38Q502W7 563 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 USP39Q53GS9 565 aaKnown RBP4.85□□□□□ -1.63
PTCH1-216ENST00000548379 SPDYAQ5MJ70 313 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 ARHGAP40Q5TG30 622 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 ERICH6BQ5W0A0 696 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 RAP1GAP2Q684P5 730 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 RNF207Q6ZRF8 634 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 USP49Q70CQ1 688 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 C1orf210Q8IVY1 113 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 ARHGEF19Q8IW93 802 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 COLGALT2Q8IYK4 626 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 ANKRD42Q8N9B4 389 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 CCDC150Q8NCX0 1101 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 FAM71BQ8TC56 605 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 IPO4Q8TEX9 1081 aaKnown RBP4.85□□□□□ -1.63
PTCH1-216ENST00000548379 SLC25A43Q8WUT9 341 aaPredicted RBP4.85□□□□□ -1.63
PTCH1-216ENST00000548379 PPP2R3CQ969Q6 453 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 MUL1Q969V5 352 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 TMEM125Q96AQ2 219 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 LENG9Q96B70 501 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 EID2BQ96D98 161 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 ZDHHC12Q96GR4 267 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 ISCA1Q9BUE6 129 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 PCDHAC1Q9H158 963 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 ZBTB26Q9HCK0 441 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 OBP2BQ9NPH6 170 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 ZMYND8Q9ULU4 1186 aaPredicted RBP4.85□□□□□ -1.63
PTCH1-216ENST00000548379 MAGED2Q9UNF1 606 aaPredicted RBP4.85□□□□□ -1.63
PTCH1-216ENST00000548379 FZD1Q9UP38 647 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 DTNAQ9Y4J8 743 aa4.85□□□□□ -1.63
PTCH1-216ENST00000548379 MAPKBP1O60336 1514 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms