RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 HPS4Q9NQG7 708 aa11□□□□□ -0.65
BEST3-208ENST00000547208 TDP1Q9NUW8 608 aa11□□□□□ -0.65
BEST3-208ENST00000547208 GCNT4Q9P109 453 aa11□□□□□ -0.65
BEST3-208ENST00000547208 UXTQ9UBK9 157 aaPredicted RBP11□□□□□ -0.65
BEST3-208ENST00000547208 NXF1Q9UBU9 619 aaKnown RBP11□□□□□ -0.65
BEST3-208ENST00000547208 MAPK8IP1Q9UQF2 711 aa11□□□□□ -0.65
BEST3-208ENST00000547208 C2orf78A6NCI8 922 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 F8VP50 259 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 IKBKBO14920 756 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 MAPK13O15264 365 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 AKAP3O75969 853 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 AVPR1AP37288 418 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 GRIK1P39086 918 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 RAP1GAPP47736 663 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 NOP14P78316 857 aaKnown RBP10.99□□□□□ -0.65
BEST3-208ENST00000547208 ZXDBP98169 803 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 PLCB2Q00722 1185 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 CYP27A1Q02318 531 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 CSTF1Q05048 431 aaKnown RBP10.99□□□□□ -0.65
BEST3-208ENST00000547208 PDAP1Q13442 181 aaKnown RBP10.99□□□□□ -0.65
BEST3-208ENST00000547208 BIRC3Q13489 604 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 ZNF699Q32M78 642 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 TRIM68Q6AZZ1 485 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 C1orf228Q6PIY5 440 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 TSSK4Q6SA08 328 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 PAQR9Q6ZVX9 377 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 SV2AQ7L0J3 742 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 RALGPS2Q86X27 583 aaPredicted RBP10.99□□□□□ -0.65
BEST3-208ENST00000547208 FMR1NBQ8N0W7 255 aaPredicted RBP10.99□□□□□ -0.65
BEST3-208ENST00000547208 GUF1Q8N442 669 aaKnown RBP10.99□□□□□ -0.65
BEST3-208ENST00000547208 ZBTB44Q8NCP5 570 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 B3GALNT2Q8NCR0 500 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 CYP2S1Q96SQ9 504 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 TTLL2Q9BWV7 592 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 ZNF518BQ9C0D4 1074 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 SEMA4AQ9H3S1 761 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 KIF9Q9HAQ2 790 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 LMAN1LQ9HAT1 526 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 GKN1Q9NS71 199 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 EPG5Q9HCE0 2579 aa10.99□□□□□ -0.65
BEST3-208ENST00000547208 RALGAPA1Q6GYQ0 2036 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 A8MXQ7 604 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 CLDN5O00501 218 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 TRIM66O15016 1216 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 CALUO43852 315 aaPredicted RBP10.98□□□□□ -0.65
BEST3-208ENST00000547208 LILRB5O75023 590 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 PHACTR2O75167 634 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 ASS1P00966 412 aaKnown RBP10.98□□□□□ -0.65
BEST3-208ENST00000547208 LMNAP02545 664 aaKnown RBP10.98□□□□□ -0.65
BEST3-208ENST00000547208 NR2F2P24468 414 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 KPNA1P52294 538 aaPredicted RBP10.98□□□□□ -0.65
BEST3-208ENST00000547208 FAM160A1Q05DH4 1040 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 USP4Q13107 963 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 CCINQ13939 588 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 ZNF77Q15935 545 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 ITPRIPL2Q3MIP1 535 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 ZNF667Q5HYK9 610 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 CEP135Q66GS9 1140 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 ZC3H14Q6PJT7 736 aaKnown RBP10.98□□□□□ -0.65
BEST3-208ENST00000547208 DENND5BQ6ZUT9 1274 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 SMYD4Q8IYR2 804 aaPredicted RBP10.98□□□□□ -0.65
BEST3-208ENST00000547208 KIAA2013Q8IYS2 634 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 SUMF1Q8NBK3 374 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 ENGASEQ8NFI3 743 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 C8orf48Q96LL4 319 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 CNTNAP3BQ96NU0 1288 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 IER2Q9BTL4 223 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 CNTNAP3Q9BZ76 1288 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 ELOVL4Q9GZR5 314 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 EBF3Q9H4W6 596 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 TRPC7Q9HCX4 862 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 RBM12Q9NTZ6 932 aaKnown RBP10.98□□□□□ -0.65
BEST3-208ENST00000547208 THG1LQ9NWX6 298 aaKnown RBP10.98□□□□□ -0.65
BEST3-208ENST00000547208 PCDHGA2Q9Y5H1 932 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 CACNA1GO43497 2377 aa10.98□□□□□ -0.65
BEST3-208ENST00000547208 SPAG17Q6Q759 2223 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 TRAV19A0A0A6YYK7 116 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 ZNF840PA6NDX5 716 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 OLFM2O95897 454 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 USP17L7P0C7H9 530 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 ARSAP15289 507 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 TCF3P15923 654 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 ASPAP45381 313 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 PSEN1P49768 467 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 VAMP7P51809 220 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 ENPEPQ07075 957 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 PPP3CAQ08209 521 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 PNOCQ13519 176 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 RUNX3Q13761 415 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 BECN1Q14457 450 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 MTF1Q14872 753 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 PON2Q15165 354 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 SGSM1Q2NKQ1 1148 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 SPOPLQ6IQ16 392 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 SCARA5Q6ZMJ2 495 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 Q6ZS52 159 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 ARL14EPQ8N8R7 260 aaPredicted RBP10.97□□□□□ -0.65
BEST3-208ENST00000547208 SPATA20Q8TB22 786 aa10.97□□□□□ -0.65
BEST3-208ENST00000547208 CCDC47Q96A33 483 aaKnown RBP10.97□□□□□ -0.65
BEST3-208ENST00000547208 DCBLD2Q96PD2 775 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms