RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 LRRC43Q8N309 656 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 ALLCQ8N6M5 410 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 SHKBP1Q8TBC3 707 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 DIS3LQ8TF46 1054 aaKnown RBP11.17□□□□□ -0.62
NPAS3-205ENST00000547068 DCAKDQ8WVC6 231 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 DDX1Q92499 740 aaKnown RBP11.17□□□□□ -0.62
NPAS3-205ENST00000547068 APOPT1Q96IL0 206 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 WWP1Q9H0M0 922 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 ACSS3Q9H6R3 686 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 SMYD3Q9H7B4 428 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 TDRD3Q9H7E2 651 aaKnown RBP11.17□□□□□ -0.62
NPAS3-205ENST00000547068 C17orf75Q9HAS0 396 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 SOX13Q9UN79 622 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 PRR5-ARHGAP8B1AHC4 643 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 TISP43B9A030 160 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 SLITRK3O94933 977 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 KRT10P13645 584 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 SERPINB8P50452 374 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 EMP3P54852 163 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 ARHGAP8P85298 464 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 PLOD1Q02809 727 aaPredicted RBP11.17□□□□□ -0.62
NPAS3-205ENST00000547068 PICALMQ13492 652 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 MYBPC2Q14324 1141 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 TBCCQ15814 346 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 HSF5Q4G112 596 aaPredicted RBP11.17□□□□□ -0.62
NPAS3-205ENST00000547068 C2CD6Q53TS8 623 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 SH3D19Q5HYK7 790 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 C1orf220Q5T0J3 134 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 ZFYVE27Q5T4F4 411 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 LLGL2Q6P1M3 1020 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 ARID3BQ8IVW6 561 aaPredicted RBP11.17□□□□□ -0.62
NPAS3-205ENST00000547068 KCTD17Q8N5Z5 321 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 EXD1Q8NHP7 514 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.17□□□□□ -0.62
NPAS3-205ENST00000547068 P2RX7Q99572 595 aaKnown RBP11.17□□□□□ -0.62
NPAS3-205ENST00000547068 CCDC106Q9BWC9 280 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 PCDH18Q9HCL0 1135 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 AVENQ9NQS1 362 aaPredicted RBP11.17□□□□□ -0.62
NPAS3-205ENST00000547068 LZTS1Q9Y250 596 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 USTQ9Y2C2 406 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 PCDHAC2Q9Y5I4 1007 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 PLIN4Q96Q06 1357 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 NFASCO94856 1347 aa11.17□□□□□ -0.62
NPAS3-205ENST00000547068 KLF11O14901 512 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 ZNF189O75820 626 aaPredicted RBP11.16□□□□□ -0.62
NPAS3-205ENST00000547068 IFNB1P01574 187 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 ATF7P17544 494 aaPredicted RBP11.16□□□□□ -0.62
NPAS3-205ENST00000547068 SERPINB6P35237 376 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 IRX4P78413 519 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 MTMR2Q13614 643 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 GRAMD1BQ3KR37 738 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 TBC1D10BQ4KMP7 808 aaPredicted RBP11.16□□□□□ -0.62
NPAS3-205ENST00000547068 SAMD7Q7Z3H4 446 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 METTL25Q8N6Q8 603 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 ZFP28Q8NHY6 868 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 CPA5Q8WXQ8 436 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 RILPQ96NA2 401 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 BTBD9Q96Q07 612 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 GCNAQ96QF7 691 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 HSD17B14Q9BPX1 270 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 GRIP2Q9C0E4 1043 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 KLHL11Q9NVR0 708 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 DMTF1Q9Y222 760 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 SSX2IPQ9Y2D8 614 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 CDK5RAP2Q96SN8 1893 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 IQANK1A0A1B0GTG1 560 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 ARHGAP10A1A4S6 786 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 SPDYE16A6NNV3 312 aaPredicted RBP11.16□□□□□ -0.62
NPAS3-205ENST00000547068 PI4K2BG5E9Z4 385 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 K7ENM7 598 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 IPO5O00410 1097 aaKnown RBP11.16□□□□□ -0.62
NPAS3-205ENST00000547068 WNT10BO00744 389 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 CHMP2AO43633 222 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 CALCAP01258 141 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 KITP10721 976 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 ATP6V1B1P15313 513 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 ZNF76P36508 570 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 AQP5P55064 265 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 COG7P83436 770 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 SLC25A3Q00325 362 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 NFX1Q12986 1120 aaKnown RBP11.16□□□□□ -0.62
NPAS3-205ENST00000547068 SLC44A4Q53GD3 710 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 ISLR2Q6UXK2 745 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 TRIM67Q6ZTA4 783 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 TMC7Q7Z402 723 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 RHPN2Q8IUC4 686 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 PALM2Q8IXS6 379 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 CYP2W1Q8TAV3 490 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 PLEKHO2Q8TD55 490 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 PRPF31Q8WWY3 499 aaKnown RBP11.16□□□□□ -0.62
NPAS3-205ENST00000547068 DHX38Q92620 1227 aaKnown RBP11.16□□□□□ -0.62
NPAS3-205ENST00000547068 SERAC1Q96JX3 654 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 ACAP3Q96P50 834 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 CBWD1Q9BRT8 395 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 IQCGQ9H095 443 aaKnown RBP11.16□□□□□ -0.62
NPAS3-205ENST00000547068 RBM38Q9H0Z9 239 aaKnown RBP11.16□□□□□ -0.62
NPAS3-205ENST00000547068 CNTN3Q9P232 1028 aa11.16□□□□□ -0.62
NPAS3-205ENST00000547068 SGK1O00141 431 aa11.15□□□□□ -0.62
NPAS3-205ENST00000547068 UNGP13051 313 aaPredicted RBP11.15□□□□□ -0.62
NPAS3-205ENST00000547068 KRT5P13647 590 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms