RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 BPIFB1Q8TDL5 484 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 WHAMMQ8TF30 809 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 SEMA4DQ92854 862 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 USP13Q92995 863 aaPredicted RBP16.3■□□□□ 0.2
SSH1-204ENST00000546697 ZNF518BQ9C0D4 1074 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 PNPLA8Q9NP80 782 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 TDP1Q9NUW8 608 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 RAB20Q9NX57 234 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 KIAA1468Q9P260 1216 aa16.3■□□□□ 0.2
SSH1-204ENST00000546697 ZNF638Q14966 1978 aaKnown RBP16.29■□□□□ 0.2
SSH1-204ENST00000546697 TRIM49BA6NDI0 452 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 GRIK1P39086 918 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 ANP32AP39687 249 aaKnown RBP16.29■□□□□ 0.2
SSH1-204ENST00000546697 RAP1GAPP47736 663 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 PDE6CP51160 858 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 NDST1P52848 882 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 USP46P62068 366 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 CYP27A1Q02318 531 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 CBWD6Q4V339 395 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 CBWD3Q5JTY5 395 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 CBWD5Q5RIA9 395 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 TXNDC8Q6A555 127 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 SMYD5Q6GMV2 418 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 SPOPLQ6IQ16 392 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 ZNF852Q6ZMS4 543 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 SCN4BQ8IWT1 228 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 ZMIZ2Q8NF64 920 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 SMARCD1Q96GM5 515 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 HNRNPABQ99729 332 aaKnown RBP16.29■□□□□ 0.2
SSH1-204ENST00000546697 IER2Q9BTL4 223 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 C8orf33Q9H7E9 229 aaPredicted RBP16.29■□□□□ 0.2
SSH1-204ENST00000546697 HEBP1Q9NRV9 189 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 ARMCX3Q9UH62 379 aaPredicted RBP16.29■□□□□ 0.2
SSH1-204ENST00000546697 MRPS17Q9Y2R5 130 aaKnown RBP16.29■□□□□ 0.2
SSH1-204ENST00000546697 COL4A3Q01955 1670 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 PATJQ8NI35 1801 aa16.29■□□□□ 0.2
SSH1-204ENST00000546697 ATP8B3O60423 1300 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 MIA3Q5JRA6 1907 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 TICRRQ7Z2Z1 1910 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 BICDL2A1A5D9 508 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 ZNF840PA6NDX5 716 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 TULP1O00294 542 aaPredicted RBP16.28■□□□□ 0.2
SSH1-204ENST00000546697 P4HA2O15460 535 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 LRRN2O75325 713 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 RTN3O95197 1032 aaPredicted RBP16.28■□□□□ 0.2
SSH1-204ENST00000546697 OAS1P00973 400 aaKnown RBP16.28■□□□□ 0.2
SSH1-204ENST00000546697 ZDHHC11BP0C7U3 371 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 ANXA13P27216 316 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 AVPR1AP37288 418 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 CDR1P51861 262 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 USP4Q13107 963 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 NUP93Q8N1F7 819 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 MAB21L3Q8N8X9 362 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 RIN3Q8TB24 985 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 EEF2KMTQ96G04 330 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 TWNKQ96RR1 684 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 FOXQ1Q9C009 403 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 DMAP1Q9NPF5 467 aaPredicted RBP16.28■□□□□ 0.2
SSH1-204ENST00000546697 HMGXB4Q9UGU5 601 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 ARHGAP26Q9UNA1 814 aa16.28■□□□□ 0.2
SSH1-204ENST00000546697 TARSP26639 723 aaKnown RBP16.27■□□□□ 0.2
SSH1-204ENST00000546697 NBL1P41271 181 aa16.27■□□□□ 0.2
SSH1-204ENST00000546697 TUBP50607 506 aa16.27■□□□□ 0.2
SSH1-204ENST00000546697 SLC7A9P82251 487 aa16.27■□□□□ 0.2
SSH1-204ENST00000546697 ZNF77Q15935 545 aa16.27■□□□□ 0.2
SSH1-204ENST00000546697 SCARA5Q6ZMJ2 495 aa16.27■□□□□ 0.2
SSH1-204ENST00000546697 TPRG1Q6ZUI0 275 aa16.27■□□□□ 0.2
SSH1-204ENST00000546697 ACOT1Q86TX2 421 aa16.27■□□□□ 0.2
SSH1-204ENST00000546697 RALGPS2Q86X27 583 aaPredicted RBP16.27■□□□□ 0.2
SSH1-204ENST00000546697 UBR7Q8N806 425 aa16.27■□□□□ 0.2
SSH1-204ENST00000546697 STKLD1Q8NE28 680 aa16.27■□□□□ 0.2
SSH1-204ENST00000546697 PDZD8Q8NEN9 1154 aa16.27■□□□□ 0.2
SSH1-204ENST00000546697 SLC22A12Q96S37 553 aa16.27■□□□□ 0.2
SSH1-204ENST00000546697 SMOQ99835 787 aa16.27■□□□□ 0.2
SSH1-204ENST00000546697 NT5C1AQ9BXI3 368 aa16.27■□□□□ 0.2
SSH1-204ENST00000546697 MAGED2Q9UNF1 606 aaPredicted RBP16.27■□□□□ 0.2
SSH1-204ENST00000546697 CCL26Q9Y258 94 aa16.27■□□□□ 0.2
SSH1-204ENST00000546697 MTF2Q9Y483 593 aaPredicted RBP16.27■□□□□ 0.2
SSH1-204ENST00000546697 HELZP42694 1942 aaKnown RBP16.26■□□□□ 0.19
SSH1-204ENST00000546697 HHLA1C9JL84 531 aa16.26■□□□□ 0.19
SSH1-204ENST00000546697 CLDN5O00501 218 aa16.26■□□□□ 0.19
SSH1-204ENST00000546697 DPYSL4O14531 572 aa16.26■□□□□ 0.19
SSH1-204ENST00000546697 NCAM2O15394 837 aa16.26■□□□□ 0.19
SSH1-204ENST00000546697 GNA14O95837 355 aa16.26■□□□□ 0.19
SSH1-204ENST00000546697 USP17L7P0C7H9 530 aa16.26■□□□□ 0.19
SSH1-204ENST00000546697 TRIM59Q8IWR1 403 aa16.26■□□□□ 0.19
SSH1-204ENST00000546697 ZNF276Q8N554 614 aa16.26■□□□□ 0.19
SSH1-204ENST00000546697 CCDC150Q8NCX0 1101 aa16.26■□□□□ 0.19
SSH1-204ENST00000546697 LMO3Q8TAP4 145 aa16.26■□□□□ 0.19
SSH1-204ENST00000546697 NELFBQ8WX92 580 aa16.26■□□□□ 0.19
SSH1-204ENST00000546697 NELL1Q92832 810 aa16.26■□□□□ 0.19
SSH1-204ENST00000546697 ELMO3Q96BJ8 720 aa16.26■□□□□ 0.19
SSH1-204ENST00000546697 KCNK16Q96T55 309 aa16.26■□□□□ 0.19
SSH1-204ENST00000546697 THG1LQ9NWX6 298 aaKnown RBP16.26■□□□□ 0.19
SSH1-204ENST00000546697 TRPM5Q9NZQ8 1165 aa16.26■□□□□ 0.19
SSH1-204ENST00000546697 PIAS3Q9Y6X2 628 aa16.26■□□□□ 0.19
SSH1-204ENST00000546697 TRAV19A0A0A6YYK7 116 aa16.25■□□□□ 0.19
SSH1-204ENST00000546697 FAM170BA6NMN3 283 aa16.25■□□□□ 0.19
SSH1-204ENST00000546697 CTHP32929 405 aa16.25■□□□□ 0.19
SSH1-204ENST00000546697 FMO5P49326 533 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms