RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 TTLL13PA6NNM8 815 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 PEX1O43933 1283 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 PYGLP06737 847 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 RFC1P35251 1148 aaPredicted RBP15.33■□□□□ 0.04
HOXC11-202ENST00000546378 CCNFP41002 786 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 OGDHQ02218 1023 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.33■□□□□ 0.04
HOXC11-202ENST00000546378 ANO5Q75V66 913 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 JOSD2Q8TAC2 188 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 SPATA18Q8TC71 538 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 SERAC1Q96JX3 654 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 EBF4Q9BQW3 602 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 IFT122Q9HBG6 1241 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 CLIC5Q9NZA1 410 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 EXOC7Q9UPT5 735 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 CDK5RAP2Q96SN8 1893 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 GOLGA8QA0A0J9YX86 632 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 GOLGA8OA6NCC3 632 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 GOLGA8NF8WBI6 632 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 TBC1D12O60347 775 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 GZMAP12544 262 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 PTPN4P29074 926 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 EIF3EP60228 445 aaKnown RBP15.33■□□□□ 0.04
HOXC11-202ENST00000546378 MYL6P60660 151 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 CYP24A1Q07973 514 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 RABGAP1LQ5R372 815 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 APOBEC3FQ8IUX4 373 aaKnown RBP15.33■□□□□ 0.04
HOXC11-202ENST00000546378 GPD1LQ8N335 351 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 DCLK2Q8N568 766 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 CEP120Q8N960 986 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 NLRP4Q96MN2 994 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 APOBEC3GQ9HC16 384 aaKnown RBP15.33■□□□□ 0.04
HOXC11-202ENST00000546378 TAS2R1Q9NYW7 299 aa15.33■□□□□ 0.04
HOXC11-202ENST00000546378 MMP14P50281 582 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 GEMIN4P57678 1058 aaKnown RBP15.32■□□□□ 0.04
HOXC11-202ENST00000546378 PSMC1P62191 440 aaKnown RBP15.32■□□□□ 0.04
HOXC11-202ENST00000546378 MRPS9P82933 396 aaKnown RBP15.32■□□□□ 0.04
HOXC11-202ENST00000546378 ACAP1Q15027 740 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 CDHR3Q6ZTQ4 885 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 DENND5BQ6ZUT9 1274 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 ILDR2Q71H61 639 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 ASRGL1Q7L266 308 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 GALNT4Q8N4A0 578 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 ADAM32Q8TC27 787 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 MAGEB5Q9BZ81 275 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 MIS12Q9H081 205 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 SEL1LQ9UBV2 794 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 PCDHB2Q9Y5E7 798 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 SMAPO00193 183 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 GPX6P59796 221 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 RPL10AP62906 217 aaKnown RBP15.32■□□□□ 0.04
HOXC11-202ENST00000546378 RALGPS1Q5JS13 557 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 C6orf163Q5TEZ5 329 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 ZNF280CQ8ND82 737 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 FEZF2Q8TBJ5 459 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 C10orf82Q8WW14 230 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 OTUD5Q96G74 571 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 NSL1Q96IY1 281 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 FEM1BQ9UK73 627 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 ZNF536O15090 1300 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 DNALI1O14645 258 aaPredicted RBP15.32■□□□□ 0.04
HOXC11-202ENST00000546378 LIASO43766 372 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 CCDC22O60826 627 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 GGPS1O95749 300 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 OAS1P00973 400 aaKnown RBP15.32■□□□□ 0.04
HOXC11-202ENST00000546378 VHLP40337 213 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 SESN2P58004 480 aaPredicted RBP15.32■□□□□ 0.04
HOXC11-202ENST00000546378 RIPK1Q13546 671 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 NCOA4Q13772 614 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 SUPT20HL1Q3ZLR7 823 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 SPOCD1Q6ZMY3 1216 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 C4orf50Q6ZRC1 276 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 RASSF3Q86WH2 238 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 KBTBD2Q8IY47 623 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 TEX9Q8N6V9 391 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 SMC1BQ8NDV3 1235 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 TMEM161BQ8NDZ6 487 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 ZNF606Q8WXB4 792 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 ASCC2Q9H1I8 757 aaPredicted RBP15.32■□□□□ 0.04
HOXC11-202ENST00000546378 POLIQ9UNA4 740 aa15.32■□□□□ 0.04
HOXC11-202ENST00000546378 ANKRD12Q6UB98 2062 aa15.31■□□□□ 0.04
HOXC11-202ENST00000546378 GOLGA8TH3BQL2 631 aa15.31■□□□□ 0.04
HOXC11-202ENST00000546378 KCNN4O15554 427 aa15.31■□□□□ 0.04
HOXC11-202ENST00000546378 TMEM63AO94886 807 aa15.31■□□□□ 0.04
HOXC11-202ENST00000546378 PTPRAP18433 802 aa15.31■□□□□ 0.04
HOXC11-202ENST00000546378 GCAP28676 217 aa15.31■□□□□ 0.04
HOXC11-202ENST00000546378 CDH6P55285 790 aa15.31■□□□□ 0.04
HOXC11-202ENST00000546378 AMHR2Q16671 573 aa15.31■□□□□ 0.04
HOXC11-202ENST00000546378 C15orf59Q2T9L4 293 aaPredicted RBP15.31■□□□□ 0.04
HOXC11-202ENST00000546378 SLC39A4Q6P5W5 647 aa15.31■□□□□ 0.04
HOXC11-202ENST00000546378 NUDCD3Q8IVD9 361 aa15.31■□□□□ 0.04
HOXC11-202ENST00000546378 ZC3H3Q8IXZ2 948 aaKnown RBP15.31■□□□□ 0.04
HOXC11-202ENST00000546378 C7orf31Q8N865 590 aa15.31■□□□□ 0.04
HOXC11-202ENST00000546378 ELP3Q9H9T3 547 aa15.31■□□□□ 0.04
HOXC11-202ENST00000546378 PRR5-ARHGAP8B1AHC4 643 aa15.31■□□□□ 0.04
HOXC11-202ENST00000546378 GSC2O15499 205 aa15.31■□□□□ 0.04
HOXC11-202ENST00000546378 SNUPNO95149 360 aaKnown RBP15.31■□□□□ 0.04
HOXC11-202ENST00000546378 ARHGAP8P85298 464 aa15.31■□□□□ 0.04
HOXC11-202ENST00000546378 PDK4Q16654 411 aa15.31■□□□□ 0.04
HOXC11-202ENST00000546378 WDR72Q3MJ13 1102 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms