RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 CSNK1G1Q9HCP0 422 aa12.61□□□□□ -0.39
YBX3-217ENST00000546164 DMAP1Q9NPF5 467 aaPredicted RBP12.61□□□□□ -0.39
YBX3-217ENST00000546164 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.61□□□□□ -0.39
YBX3-217ENST00000546164 IL37Q9NZH6 218 aa12.61□□□□□ -0.39
YBX3-217ENST00000546164 ARNTLO00327 626 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 PRAMEF12O95522 483 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 CCDC192P0DO97 292 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 CCDC130P13994 396 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 CD58P19256 250 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 AOC1P19801 751 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 PPP3CCP48454 512 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 VCPP55072 806 aaKnown RBP12.6□□□□□ -0.39
YBX3-217ENST00000546164 STARD6P59095 220 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 USP46P62068 366 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 ZNF268Q14587 947 aaPredicted RBP12.6□□□□□ -0.39
YBX3-217ENST00000546164 SLC44A4Q53GD3 710 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 CT47A1Q5JQC4 288 aaPredicted RBP12.6□□□□□ -0.39
YBX3-217ENST00000546164 RBM43Q6ZSC3 357 aaKnown RBP12.6□□□□□ -0.39
YBX3-217ENST00000546164 NUP93Q8N1F7 819 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 CELF5Q8N6W0 485 aaKnown RBP12.6□□□□□ -0.39
YBX3-217ENST00000546164 C12orf29Q8N999 325 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 GPT2Q8TD30 523 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 SLC2A14Q8TDB8 520 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 IRF7Q92985 503 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 TATDN2Q93075 761 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 PRRX2Q99811 253 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 BRD9Q9H8M2 597 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 KIF9Q9HAQ2 790 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 KRT82Q9NSB4 513 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 CISHQ9NSE2 258 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 COMMD8Q9NX08 183 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 CA14Q9ULX7 337 aa12.6□□□□□ -0.39
YBX3-217ENST00000546164 FAM92AA1XBS5 289 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 ZNF840PA6NDX5 716 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 DPYSL4O14531 572 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 TNFRSF10BO14763 440 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 ZNF263O14978 683 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 CHADO15335 359 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 AP1G2O75843 785 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 RTN3O95197 1032 aaPredicted RBP12.59□□□□□ -0.39
YBX3-217ENST00000546164 TBXAS1P24557 533 aaPredicted RBP12.59□□□□□ -0.39
YBX3-217ENST00000546164 ERCC5P28715 1186 aaPredicted RBP12.59□□□□□ -0.39
YBX3-217ENST00000546164 GDI1P31150 447 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 AVPR1AP37288 418 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 MLLT6P55198 1093 aaPredicted RBP12.59□□□□□ -0.39
YBX3-217ENST00000546164 CETN1Q12798 172 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 ORC1Q13415 861 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 CUL2Q13617 745 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 GRM2Q14416 872 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 MLF2Q15773 248 aaPredicted RBP12.59□□□□□ -0.39
YBX3-217ENST00000546164 DPCR1Q3MIW9 517 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 IER5LQ5T953 404 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 TXNDC8Q6A555 127 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 UBR7Q8N806 425 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 TMEM105Q8N8V8 129 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 MAB21L3Q8N8X9 362 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 ZMIZ2Q8NF64 920 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 FLCNQ8NFG4 579 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 LMO3Q8TAP4 145 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 OVCA2Q8WZ82 227 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 USP13Q92995 863 aaPredicted RBP12.59□□□□□ -0.39
YBX3-217ENST00000546164 LRRC3BQ96PB8 259 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 KCNK16Q96T55 309 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 SMOQ99835 787 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 ARID3AQ99856 593 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 MED10Q9BTT4 135 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 TBC1D17Q9HA65 648 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 PNPLA8Q9NP80 782 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 FAM49BQ9NUQ9 324 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 TRPM5Q9NZQ8 1165 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 GCNT4Q9P109 453 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 RAPGEFL1Q9UHV5 662 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 DACH1Q9UI36 760 aa12.59□□□□□ -0.39
YBX3-217ENST00000546164 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.59□□□□□ -0.39
YBX3-217ENST00000546164 TRAV19A0A0A6YYK7 116 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 OLFM2O95897 454 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 AFPP02771 609 aaKnown RBP12.58□□□□□ -0.4
YBX3-217ENST00000546164 FAM200BP0CF97 657 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 TCF3P15923 654 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 PDE6CP51160 858 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 SLC5A3P53794 718 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 RAD23BP54727 409 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 YWHAEP62258 255 aaKnown RBP12.58□□□□□ -0.4
YBX3-217ENST00000546164 PLCB2Q00722 1185 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 KCNH2Q12809 1159 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 ARHGAP29Q52LW3 1261 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 IRF2BP1Q8IU81 584 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 YAF2Q8IY57 180 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 SLC4A11Q8NBS3 891 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 PDZD8Q8NEN9 1154 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 BPIFB1Q8TDL5 484 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 NUP210Q8TEM1 1887 aaPredicted RBP12.58□□□□□ -0.4
YBX3-217ENST00000546164 CYFIP2Q96F07 1278 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 CNOT6LQ96LI5 555 aaKnown RBP12.58□□□□□ -0.4
YBX3-217ENST00000546164 NT5C1BQ96P26 610 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 SLITRK1Q96PX8 696 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 OSBPL6Q9BZF3 934 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 TDP1Q9NUW8 608 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 PIEZO1Q92508 2521 aa12.58□□□□□ -0.4
YBX3-217ENST00000546164 GREB1Q4ZG55 1949 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms