RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 C1QTNF9P0C862 333 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 CEACAM1P13688 526 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 HNRNPLP14866 589 aaKnown RBP eCLIP17.84■□□□□ 0.45
CPSF7-225ENST00000545934 LMO2P25791 158 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 PDE6CP51160 858 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 USP46P62068 366 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 SLC7A9P82251 487 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 ZNF252P-AS1Q0IIN9 211 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 CRY1Q16526 586 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 C2orf27AQ580R0 203 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 SH3PXD2AQ5TCZ1 1133 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 LARP1BQ659C4 914 aaKnown RBP17.84■□□□□ 0.45
CPSF7-225ENST00000545934 UNQ6494/PRO21346Q6UXR6 183 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 TMEM92Q6UXU6 159 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 C4orf50Q6ZRC1 276 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 KDF1Q8NAX2 398 aaPredicted RBP17.84■□□□□ 0.45
CPSF7-225ENST00000545934 TTC16Q8NEE8 873 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 MYLPFQ96A32 169 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 TTLL2Q9BWV7 592 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 TMEM9BQ9NQ34 198 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 MAGEC2Q9UBF1 373 aaPredicted RBP17.84■□□□□ 0.45
CPSF7-225ENST00000545934 FBXO2Q9UK22 296 aaPredicted RBP17.84■□□□□ 0.45
CPSF7-225ENST00000545934 RALYQ9UKM9 306 aaKnown RBP17.84■□□□□ 0.45
CPSF7-225ENST00000545934 CDH9Q9ULB4 789 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 SMC3Q9UQE7 1217 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 PCDHB13Q9Y5F0 798 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 PCNX2A6NKB5 2137 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 ZZEF1O43149 2961 aa17.84■□□□□ 0.45
CPSF7-225ENST00000545934 LEFTY2O00292 366 aa17.83■□□□□ 0.44
CPSF7-225ENST00000545934 GCNT3O95395 438 aa17.83■□□□□ 0.44
CPSF7-225ENST00000545934 CYP17A1P05093 508 aa17.83■□□□□ 0.44
CPSF7-225ENST00000545934 KRT19P08727 400 aa17.83■□□□□ 0.44
CPSF7-225ENST00000545934 MRPS21P82921 87 aaKnown RBP17.83■□□□□ 0.44
CPSF7-225ENST00000545934 ALCAMQ13740 583 aa17.83■□□□□ 0.44
CPSF7-225ENST00000545934 ANO7Q6IWH7 933 aa17.83■□□□□ 0.44
CPSF7-225ENST00000545934 DENND5BQ6ZUT9 1274 aa17.83■□□□□ 0.44
CPSF7-225ENST00000545934 ADGRG2Q8IZP9 1017 aa17.83■□□□□ 0.44
CPSF7-225ENST00000545934 SYT15Q9BQS2 421 aa17.83■□□□□ 0.44
CPSF7-225ENST00000545934 RNF38Q9H0F5 515 aa17.83■□□□□ 0.44
CPSF7-225ENST00000545934 INTS13Q9NVM9 706 aa17.83■□□□□ 0.44
CPSF7-225ENST00000545934 CCDC39Q9UFE4 941 aa17.83■□□□□ 0.44
CPSF7-225ENST00000545934 EVLQ9UI08 416 aaPredicted RBP17.83■□□□□ 0.44
CPSF7-225ENST00000545934 AKAP13Q12802 2813 aa17.83■□□□□ 0.44
CPSF7-225ENST00000545934 MYH10P35580 1976 aa17.82■□□□□ 0.44
CPSF7-225ENST00000545934 A0A0A0MRY4 1105 aa17.82■□□□□ 0.44
CPSF7-225ENST00000545934 ZNF840PA6NDX5 716 aa17.82■□□□□ 0.44
CPSF7-225ENST00000545934 TMEM191BP0C7N4 346 aa17.82■□□□□ 0.44
CPSF7-225ENST00000545934 WARSP23381 471 aaKnown RBP17.82■□□□□ 0.44
CPSF7-225ENST00000545934 SEC13P55735 322 aa17.82■□□□□ 0.44
CPSF7-225ENST00000545934 PSMC1P62191 440 aaKnown RBP17.82■□□□□ 0.44
CPSF7-225ENST00000545934 NOP14P78316 857 aaKnown RBP17.82■□□□□ 0.44
CPSF7-225ENST00000545934 SV2BQ7L1I2 683 aa17.82■□□□□ 0.44
CPSF7-225ENST00000545934 CYP2U1Q7Z449 544 aa17.82■□□□□ 0.44
CPSF7-225ENST00000545934 FILIP1Q7Z7B0 1213 aa17.82■□□□□ 0.44
CPSF7-225ENST00000545934 GPD1LQ8N335 351 aa17.82■□□□□ 0.44
CPSF7-225ENST00000545934 OR5B17Q8NGF7 314 aa17.82■□□□□ 0.44
CPSF7-225ENST00000545934 HPDLQ96IR7 371 aa17.82■□□□□ 0.44
CPSF7-225ENST00000545934 ZMIZ1Q9ULJ6 1067 aa17.82■□□□□ 0.44
CPSF7-225ENST00000545934 NME7Q9Y5B8 376 aa17.82■□□□□ 0.44
CPSF7-225ENST00000545934 SRPRBQ9Y5M8 271 aaKnown RBP17.82■□□□□ 0.44
CPSF7-225ENST00000545934 CLIC4Q9Y696 253 aa17.82■□□□□ 0.44
CPSF7-225ENST00000545934 FAM208BQ5VWN6 2430 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 OAS1P00973 400 aaKnown RBP17.81■□□□□ 0.44
CPSF7-225ENST00000545934 BDNFP23560 247 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 EIF2DP41214 584 aaKnown RBP17.81■□□□□ 0.44
CPSF7-225ENST00000545934 P2RY2P41231 377 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 PPP3CCP48454 512 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 IRX4P78413 519 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 MESP2Q0VG99 397 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 FOXC1Q12948 553 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 MYO1EQ12965 1108 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 MAPRE1Q15691 268 aaKnown RBP17.81■□□□□ 0.44
CPSF7-225ENST00000545934 RRAGBQ5VZM2 374 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 LMBRD2Q68DH5 695 aaPredicted RBP17.81■□□□□ 0.44
CPSF7-225ENST00000545934 SFTPA1Q8IWL2 248 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 CCDC33Q8N5R6 958 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 IL17RCQ8NAC3 791 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 MYCBPAPQ8TBZ2 947 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 PCED1BQ96HM7 432 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 ADAM33Q9BZ11 813 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 PCIF1Q9H4Z3 704 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 TRPM5Q9NZQ8 1165 aa17.81■□□□□ 0.44
CPSF7-225ENST00000545934 KIAA0391O15091 583 aaKnown RBP17.8■□□□□ 0.44
CPSF7-225ENST00000545934 TOP3BO95985 862 aaKnown RBP17.8■□□□□ 0.44
CPSF7-225ENST00000545934 GRIK1P39086 918 aa17.8■□□□□ 0.44
CPSF7-225ENST00000545934 KIR2DL1P43626 348 aaPredicted RBP17.8■□□□□ 0.44
CPSF7-225ENST00000545934 SLC6A11P48066 632 aa17.8■□□□□ 0.44
CPSF7-225ENST00000545934 DHCR24Q15392 516 aa17.8■□□□□ 0.44
CPSF7-225ENST00000545934 HSF5Q4G112 596 aaPredicted RBP17.8■□□□□ 0.44
CPSF7-225ENST00000545934 PEAR1Q5VY43 1037 aaPredicted RBP17.8■□□□□ 0.44
CPSF7-225ENST00000545934 SYCP3Q8IZU3 236 aa17.8■□□□□ 0.44
CPSF7-225ENST00000545934 PHTF2Q8N3S3 785 aa17.8■□□□□ 0.44
CPSF7-225ENST00000545934 GATA6Q92908 595 aa17.8■□□□□ 0.44
CPSF7-225ENST00000545934 ANKRD36BP1Q96IX9 119 aa17.8■□□□□ 0.44
CPSF7-225ENST00000545934 C8orf48Q96LL4 319 aa17.8■□□□□ 0.44
CPSF7-225ENST00000545934 FNBP1Q96RU3 617 aa17.8■□□□□ 0.44
CPSF7-225ENST00000545934 TMEM30AQ9NV96 361 aa17.8■□□□□ 0.44
CPSF7-225ENST00000545934 EHD2Q9NZN4 543 aa17.8■□□□□ 0.44
CPSF7-225ENST00000545934 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.8■□□□□ 0.44
CPSF7-225ENST00000545934 SGK1O00141 431 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms