RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 CDH24Q86UP0 819 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 PALB2Q86YC2 1186 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 NOSTRINQ8IVI9 506 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 SLC22A9Q8IVM8 553 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 ELMOD2Q8IZ81 293 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 SLC38A6Q8IZM9 456 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 CARFQ8N187 725 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 ARHGAP24Q8N264 748 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 ALLCQ8N6M5 410 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.36□□□□□ -1.55
UBE4A-203ENST00000545354 CLHC1Q8NHS4 586 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 NAT14Q8WUY8 206 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 DEPDC1BQ8WUY9 529 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 SYMPKQ92797 1274 aaKnown RBP5.36□□□□□ -1.55
UBE4A-203ENST00000545354 INPP5DQ92835 1189 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 ZDHHC12Q96GR4 267 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 CCDC43Q96MW1 224 aaKnown RBP5.36□□□□□ -1.55
UBE4A-203ENST00000545354 PIGSQ96S52 555 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 CCT8L2Q96SF2 557 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 USB1Q9BQ65 265 aaKnown RBP5.36□□□□□ -1.55
UBE4A-203ENST00000545354 NTPCRQ9BSD7 190 aaKnown RBP5.36□□□□□ -1.55
UBE4A-203ENST00000545354 PHF20Q9BVI0 1012 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 ZNF341Q9BYN7 854 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 POLR1EQ9GZS1 481 aaKnown RBP5.36□□□□□ -1.55
UBE4A-203ENST00000545354 CCDC86Q9H6F5 360 aaKnown RBP5.36□□□□□ -1.55
UBE4A-203ENST00000545354 INTS7Q9NVH2 962 aaKnown RBP5.36□□□□□ -1.55
UBE4A-203ENST00000545354 ASNSD1Q9NWL6 643 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 SAGE1Q9NXZ1 904 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 HSPBP1Q9NZL4 362 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 OR6C2Q9NZP2 312 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 SELENONQ9NZV5 590 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 NYAP2Q9P242 653 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 STOML1Q9UBI4 398 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 GGA1Q9UJY5 639 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 RCOR1Q9UKL0 485 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 SPATA2Q9UM82 520 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 SAMM50Q9Y512 469 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 SESN1Q9Y6P5 492 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 WDR33Q9C0J8 1336 aaKnown RBP5.36□□□□□ -1.55
UBE4A-203ENST00000545354 CPDO75976 1380 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 UHRF1BP1Q6BDS2 1440 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 DENND4BO75064 1496 aaPredicted RBP5.36□□□□□ -1.55
UBE4A-203ENST00000545354 FER1L4A9Z1Z3 1794 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 MINK1Q8N4C8 1332 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 WDR19Q8NEZ3 1342 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 SLC12A8A0AV02 714 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 ZNF879B4DU55 563 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 BMP10O95393 424 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 FGRP09769 529 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 WEE2P0C1S8 567 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 FAM228BP0C875 321 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 PCSK2P16519 638 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 HDCP19113 662 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 CYP3A5P20815 502 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 CCNE1P24864 410 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 LMOD1P29536 600 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 POU3F4P49335 361 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 AIF1P55008 147 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 RNASE9P60153 205 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 RPL26P61254 145 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 RPL10AP62906 217 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 RHAGQ02094 409 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 PPARAQ07869 468 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 PLD1Q13393 1074 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 HNRNPDQ14103 355 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 ITIH4Q14624 930 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 TLR1Q15399 786 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 SF3B4Q15427 424 aaKnown RBP eCLIP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 AANATQ16613 207 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 TBRG1Q3YBR2 411 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 GTF2IRD2BQ6EKJ0 949 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 RWDD4Q6NW29 188 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 XKR5Q6UX68 686 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 OTOP3Q7RTS5 596 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 GSTA5Q7RTV2 222 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 PODNQ7Z5L7 613 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 GTF2IRD2Q86UP8 949 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 CDKL3Q8IVW4 592 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 ZSCAN29Q8IWY8 852 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 TCAIMQ8N3R3 496 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 ADAMTS16Q8TE57 1224 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 BSNDQ8WZ55 320 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 SLC22A18Q96BI1 424 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 LRRC39Q96DD0 335 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 NGLY1Q96IV0 654 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 SEC62Q99442 399 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 NUP88Q99567 741 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 RIT2Q99578 217 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 PIP5K1AQ99755 562 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 ZCCHC2Q9C0B9 1178 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 LHX5Q9H2C1 402 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 SYNDIG1Q9H7V2 258 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 SP110Q9HB58 689 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 TOPORSQ9NS56 1045 aaPredicted RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 GGA3Q9NZ52 723 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 FETUBQ9UGM5 382 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 RUVBL1Q9Y265 456 aaKnown RBP5.35□□□□□ -1.55
UBE4A-203ENST00000545354 COQ6Q9Y2Z9 468 aa5.35□□□□□ -1.55
UBE4A-203ENST00000545354 DAGLAQ9Y4D2 1042 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms