RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 VPS33AQ96AX1 596 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 MIEF2Q96C03 454 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 C9orf72Q96LT7 481 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 QKIQ96PU8 341 aaKnown RBP eCLIP10.77□□□□□ -0.692e-6■■■■■ 38
PCDH9-204ENST00000544246 OSBPL3Q9H4L5 887 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 DUSP12Q9UNI6 340 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 PIK3C2BO00750 1634 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 MTSS1O43312 755 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 CYP2E1P05181 493 aaPredicted RBP10.77□□□□□ -0.69
PCDH9-204ENST00000544246 FCGR1AP12314 374 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 GRK3P35626 688 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 RCN1Q15293 331 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 HAUS6Q7Z4H7 955 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 IZUMO1Q8IYV9 350 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 SVOPQ8N4V2 548 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 SH2D3CQ8N5H7 860 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 SLC30A5Q8TAD4 765 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 CCDC126Q96EE4 140 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 WRNIP1Q96S55 665 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 RSAD1Q9HA92 442 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 POLD4Q9HCU8 107 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 SNX9Q9Y5X1 595 aa10.77□□□□□ -0.69
PCDH9-204ENST00000544246 C2orf81A6NN90 581 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 PCNAP12004 261 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 PTGER2P43116 358 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 EIF2B2P49770 351 aaKnown RBP10.76□□□□□ -0.69
PCDH9-204ENST00000544246 SV2CQ496J9 727 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 BNC2Q6ZN30 1099 aaPredicted RBP10.76□□□□□ -0.69
PCDH9-204ENST00000544246 PPIL6Q8IXY8 311 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 RNF149Q8NC42 400 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 FRMD6Q96NE9 622 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 S100A13Q99584 98 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 ING3Q9NXR8 418 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 SLC25A13Q9UJS0 675 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 VPS26AO75436 327 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 LARGE1O95461 756 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 GPD1P21695 349 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 YWHABP31946 246 aaKnown RBP10.76□□□□□ -0.69
PCDH9-204ENST00000544246 ITGA1P56199 1179 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 PLIN5Q00G26 463 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 DDX39BQ13838 428 aaKnown RBP10.76□□□□□ -0.69
PCDH9-204ENST00000544246 UBASH3BQ8TF42 649 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 TINF2Q9BSI4 451 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 KLHL4Q9C0H6 718 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 POLG2Q9UHN1 485 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 MEI4A8MW99 385 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 ZNF185O15231 689 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 CD4P01730 458 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 OTUD4Q01804 1114 aaKnown RBP10.76□□□□□ -0.69
PCDH9-204ENST00000544246 RALGDSQ12967 914 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 GRM4Q14833 912 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 TAF2Q6P1X5 1199 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 TMEM26Q6ZUK4 368 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 USP13Q92995 863 aaPredicted RBP10.76□□□□□ -0.69
PCDH9-204ENST00000544246 ZNF624Q9P2J8 865 aaPredicted RBP10.76□□□□□ -0.69
PCDH9-204ENST00000544246 APEX2Q9UBZ4 518 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 MGAT4DA6NG13 374 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 TBKBP1A7MCY6 615 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 ANXA9O76027 345 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 TARSP26639 723 aaKnown RBP10.76□□□□□ -0.69
PCDH9-204ENST00000544246 PSMB9P28065 219 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 TAB1Q15750 504 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 DGKDQ16760 1214 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 STX12Q86Y82 276 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 RMND5BQ96G75 393 aaPredicted RBP10.76□□□□□ -0.69
PCDH9-204ENST00000544246 KLF6Q99612 283 aaPredicted RBP10.76□□□□□ -0.69
PCDH9-204ENST00000544246 TMEM47Q9BQJ4 181 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 STK33Q9BYT3 514 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 ROGDIQ9GZN7 287 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 C6orf62Q9GZU0 229 aaPredicted RBP10.76□□□□□ -0.69
PCDH9-204ENST00000544246 EFCAB1Q9HAE3 211 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 TRIM39Q9HCM9 518 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 PDXKO00764 312 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 MED26O95402 600 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 ZNF24P17028 368 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 PEX5P50542 639 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 IL5RAQ01344 420 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 TRAF2Q12933 501 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 TSNQ15631 228 aaKnown RBP10.76□□□□□ -0.69
PCDH9-204ENST00000544246 MGAT5BQ3V5L5 792 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 ATP6AP1LQ52LC2 224 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 MROH9Q5TGP6 573 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 ATG16L2Q8NAA4 619 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 IL17REQ8NFR9 667 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 KCTD14Q9BQ13 255 aaPredicted RBP10.76□□□□□ -0.69
PCDH9-204ENST00000544246 NOD2Q9HC29 1040 aa10.76□□□□□ -0.69
PCDH9-204ENST00000544246 NPC1L1Q9UHC9 1359 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 NEDD4P46934 1319 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 SPATA31A5Q5VU36 1347 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 SPATA31A7Q8IWB4 1347 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 GLRA3O75311 464 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 NOS3P29474 1203 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 FDFT1P37268 417 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 ITGA8P53708 1063 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 GPSM2P81274 684 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 TCEAL5Q5H9L2 206 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 CASP12Q6UXS9 341 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 MYO1HQ8N1T3 1032 aa10.75□□□□□ -0.69
PCDH9-204ENST00000544246 ZNF669Q96BR6 464 aaPredicted RBP10.75□□□□□ -0.69
PCDH9-204ENST00000544246 SERPINB12Q96P63 405 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms