RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 SRPK1Q96SB4 655 aaKnown RBP13.22□□□□□ -0.29
SMG8-202ENST00000543872 FIZ1Q96SL8 496 aa13.22□□□□□ -0.29
SMG8-202ENST00000543872 RTFDC1Q9BY42 306 aaPredicted RBP13.22□□□□□ -0.29
SMG8-202ENST00000543872 AK5Q9Y6K8 562 aa13.22□□□□□ -0.29
SMG8-202ENST00000543872 KIAA1551Q9HCM1 1747 aa13.22□□□□□ -0.29
SMG8-202ENST00000543872 SLC5A2P31639 672 aa13.22□□□□□ -0.29
SMG8-202ENST00000543872 STIP1P31948 543 aaKnown RBP13.22□□□□□ -0.29
SMG8-202ENST00000543872 GSTM4Q03013 218 aa13.22□□□□□ -0.29
SMG8-202ENST00000543872 SULT2A1Q06520 285 aa13.22□□□□□ -0.29
SMG8-202ENST00000543872 CYTH1Q15438 398 aa13.22□□□□□ -0.29
SMG8-202ENST00000543872 C1orf220Q5T0J3 134 aa13.22□□□□□ -0.29
SMG8-202ENST00000543872 CRLF3Q8IUI8 442 aa13.22□□□□□ -0.29
SMG8-202ENST00000543872 NUDCD3Q8IVD9 361 aa13.22□□□□□ -0.29
SMG8-202ENST00000543872 LENG9Q96B70 501 aa13.22□□□□□ -0.29
SMG8-202ENST00000543872 RAB20Q9NX57 234 aa13.22□□□□□ -0.29
SMG8-202ENST00000543872 PKD2L1Q9P0L9 805 aa13.22□□□□□ -0.29
SMG8-202ENST00000543872 STRIP2Q9ULQ0 834 aa13.22□□□□□ -0.29
SMG8-202ENST00000543872 CYP3A7-CYP3A51PA0A087WV96 503 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 ARHGAP10A1A4S6 786 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 DDX39AO00148 427 aaKnown RBP13.21□□□□□ -0.29
SMG8-202ENST00000543872 CYP3A7P24462 503 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 ATXN3P54252 364 aaPredicted RBP13.21□□□□□ -0.29
SMG8-202ENST00000543872 KRT81Q14533 505 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 GRAMD4Q6IC98 578 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 RSPH3Q86UC2 560 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 ALLCQ8N6M5 410 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 RIN3Q8TB24 985 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 VTI1AQ96AJ9 217 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 NT5C1BQ96P26 610 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 ACSS3Q9H6R3 686 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 SSU72Q9NP77 194 aaKnown RBP13.21□□□□□ -0.29
SMG8-202ENST00000543872 HSPBP1Q9NZL4 362 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 HEY1Q9Y5J3 304 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 MAD1L1Q9Y6D9 718 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 ATRNL1Q5VV63 1379 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 IQANK1A0A1B0GTG1 560 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 ARHGEF35A5YM69 484 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 C6orf229H3BNL8 230 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 ETV4P43268 484 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 CBWD2Q8IUF1 395 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 XXYLT1Q8NBI6 393 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 APOPT1Q96IL0 206 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 FAM20AQ96MK3 541 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 CSRNP1Q96S65 589 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 VAV3Q9UKW4 847 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 ZNF652Q9Y2D9 606 aa13.21□□□□□ -0.29
SMG8-202ENST00000543872 TRIM49D1C9J1S8 452 aa13.21□□□□□ -0.3
SMG8-202ENST00000543872 TLR3O15455 904 aaKnown RBP13.21□□□□□ -0.3
SMG8-202ENST00000543872 TFPTP0C1Z6 253 aa13.21□□□□□ -0.3
SMG8-202ENST00000543872 SRGAP2CP0DJJ0 459 aa13.21□□□□□ -0.3
SMG8-202ENST00000543872 SRGAP2BP0DMP2 458 aa13.21□□□□□ -0.3
SMG8-202ENST00000543872 ALDH1A3P47895 512 aa13.21□□□□□ -0.3
SMG8-202ENST00000543872 PSMD7P51665 324 aa13.21□□□□□ -0.3
SMG8-202ENST00000543872 C16orf72Q14CZ0 275 aa13.21□□□□□ -0.3
SMG8-202ENST00000543872 DEFB107AQ8IZN7 70 aa13.21□□□□□ -0.3
SMG8-202ENST00000543872 PPM1NQ8N819 430 aa13.21□□□□□ -0.3
SMG8-202ENST00000543872 TAS1R2Q8TE23 839 aa13.21□□□□□ -0.3
SMG8-202ENST00000543872 MMP19Q99542 508 aa13.21□□□□□ -0.3
SMG8-202ENST00000543872 TCRBV7S3A2A0A539 114 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 GRIN3BO60391 1043 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 STT3AP46977 705 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 LPIN1Q14693 890 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 AMIGO2Q86SJ2 522 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 POMGNT1Q8WZA1 660 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 IFT122Q9HBG6 1241 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 TELO2Q9Y4R8 837 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 LAMB1P07942 1786 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 TOM1L1O75674 476 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 POLR2MP0CAP2 368 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 SNHG28P0DPA3 235 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 NELFEP18615 380 aaKnown RBP13.2□□□□□ -0.3
SMG8-202ENST00000543872 CD97P48960 835 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 NAA20P61599 178 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 CHSY1Q86X52 802 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 GSDMBQ8TAX9 411 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 DIS3LQ8TF46 1054 aaKnown RBP13.2□□□□□ -0.3
SMG8-202ENST00000543872 MZB1Q8WU39 189 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 DDX1Q92499 740 aaKnown RBP13.2□□□□□ -0.3
SMG8-202ENST00000543872 DCUN1D1Q96GG9 259 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 CCDC106Q9BWC9 280 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 TIMMDC1Q9NPL8 285 aa13.2□□□□□ -0.3
SMG8-202ENST00000543872 XPO1O14980 1071 aaKnown RBP13.19□□□□□ -0.3
SMG8-202ENST00000543872 ADRB2P07550 413 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 ADRA2BP18089 450 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 MSX2P35548 267 aaPredicted RBP13.19□□□□□ -0.3
SMG8-202ENST00000543872 NRLP54845 237 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 MTTPP55157 894 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 BASP1P80723 227 aaKnown RBP13.19□□□□□ -0.3
SMG8-202ENST00000543872 NFIL3Q16649 462 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 GPATCH4Q5T3I0 446 aaKnown RBP13.19□□□□□ -0.3
SMG8-202ENST00000543872 KYAT3Q6YP21 454 aaKnown RBP13.19□□□□□ -0.3
SMG8-202ENST00000543872 SENP7Q9BQF6 1050 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 EPB41L1Q9H4G0 881 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 DMTF1Q9Y222 760 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 A0A1B0GTW7 788 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 SLC26A4O43511 780 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 PEX1O43933 1283 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 FOXD2O60548 495 aaPredicted RBP13.19□□□□□ -0.3
SMG8-202ENST00000543872 CFHP08603 1231 aa13.19□□□□□ -0.3
SMG8-202ENST00000543872 NCF2P19878 526 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms