RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 TTC8Q8TAM2 541 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CCDC47Q96A33 483 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 MSANTD3Q96H12 275 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 APOBEC3GQ9HC16 384 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 PRMT8Q9NR22 394 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 GKN1Q9NS71 199 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 FRMD4BQ9Y2L6 1034 aa13.97□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CLDN5O00501 218 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TRIM66O15016 1216 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 HLA-DRAP01903 254 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TRIM49P0CI25 452 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TRIM49CP0CI26 452 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ASPAP45381 313 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 VAMP7P51809 220 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ADAM9Q13443 819 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ZNF77Q15935 545 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 EDRF1Q3B7T1 1238 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 COBLL1Q53SF7 1204 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TRIM68Q6AZZ1 485 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 SPOPLQ6IQ16 392 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 INTS8Q75QN2 995 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 RALGPS2Q86X27 583 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 CRYBG2Q8N1P7 616 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TAS1R2Q8TE23 839 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 TAF4BQ92750 862 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ELOVL4Q9GZR5 314 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 KIF9Q9HAQ2 790 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 IL37Q9NZH6 218 aa13.96□□□□□ -0.17
TNFRSF1A-215ENST00000543359 ZNF840PA6NDX5 716 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 TNFRSF10BO14763 440 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 LAMTOR5O43504 91 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 TCF3P15923 654 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 PSMC2P35998 433 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 PRCPP42785 496 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 GCLMP48507 274 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 KPNA1P52294 538 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 CSTF1Q05048 431 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 FAM160A1Q05DH4 1040 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 CCINQ13939 588 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ITPRIPL2Q3MIP1 535 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 C1orf228Q6PIY5 440 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 TSSK4Q6SA08 328 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SCARA5Q6ZMJ2 495 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ZC3H3Q8IXZ2 948 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 FAM186BQ8IYM0 893 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 FUKQ8N0W3 1084 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ARL14EPQ8N8R7 260 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ZBTB44Q8NCP5 570 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ERCC4Q92889 916 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 TIGD1Q96MW7 591 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 KCNK16Q96T55 309 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 RNF38Q9H0F5 515 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SEMA4AQ9H3S1 761 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 EBF3Q9H4W6 596 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 TRPC7Q9HCX4 862 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 RBM12Q9NTZ6 932 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 THG1LQ9NWX6 298 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 HMGXB4Q9UGU5 601 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 PCDHA5Q9Y5H7 936 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 CACNA1AO00555 2505 aa13.95□□□□□ -0.18
TNFRSF1A-215ENST00000543359 HELZP42694 1942 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 TRAV19A0A0A6YYK7 116 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 OLFM2O95897 454 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 USP17L7P0C7H9 530 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ARSAP15289 507 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 RPL13P26373 211 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 NDST1P52848 882 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 INCA1Q0VD86 236 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 TAF10Q12962 218 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 USP4Q13107 963 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 RUNX3Q13761 415 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ZNF658Q5TYW1 1059 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ACOT1Q86TX2 421 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ELOA2Q8IYF1 753 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SUMF1Q8NBK3 374 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ZMIZ2Q8NF64 920 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 OSCP1Q8WVF1 389 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 EEF2KMTQ96G04 330 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 GSDMAQ96QA5 445 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 TWNKQ96RR1 684 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 IER2Q9BTL4 223 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 C2orf42Q9NWW7 574 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 TRPM5Q9NZQ8 1165 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ARHGAP26Q9UNA1 814 aa13.94□□□□□ -0.18
TNFRSF1A-215ENST00000543359 FAM92AA1XBS5 289 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 LILRB5O75023 590 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 LMNAP02545 664 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 CKMP06732 381 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 PFKLP17858 780 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 HDCP19113 662 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ANXA13P27216 316 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 PPP3CCP48454 512 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 PMS1P54277 932 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 SLC7A9P82251 487 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 ORC1Q13415 861 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 MTF1Q14872 753 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 PON2Q15165 354 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 EML3Q32P44 896 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 Q6ZS52 159 aa13.93□□□□□ -0.18
TNFRSF1A-215ENST00000543359 FAM35AQ86V20 835 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms