RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 HMBSP08397 361 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 CHRM3P20309 590 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 TAF6P49848 677 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 RPS6P62753 249 aaKnown RBP13.59□□□□□ -0.23
TNC-212ENST00000542877 OTUD4Q01804 1114 aaKnown RBP13.59□□□□□ -0.23
TNC-212ENST00000542877 TERB1Q8NA31 727 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 MUC3BQ9H195 1237 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 OGTO15294 1046 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 AP5Z1O43299 807 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 UBOX5O94941 541 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 ALDH1A1P00352 501 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 VDRP11473 427 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 EPHB2P29323 1055 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 SOX11P35716 441 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 CSTF3Q12996 717 aaKnown RBP13.59□□□□□ -0.23
TNC-212ENST00000542877 FAXCQ5TGI0 409 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 MTDHQ86UE4 582 aaKnown RBP13.59□□□□□ -0.23
TNC-212ENST00000542877 ABHD8Q96I13 439 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 LRRC40Q9H9A6 602 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 AAR2Q9Y312 384 aaKnown RBP13.59□□□□□ -0.23
TNC-212ENST00000542877 HOXD10P28358 340 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 AQP5P55064 265 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 SLC44A4Q53GD3 710 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 CBWD2Q8IUF1 395 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 LRRC71Q8N4P6 559 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 AGBL1Q96MI9 1066 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 TMEM120AQ9BXJ8 343 aa13.59□□□□□ -0.23
TNC-212ENST00000542877 UBE2OQ9C0C9 1292 aaKnown RBP13.59□□□□□ -0.23
TNC-212ENST00000542877 CEMIPQ8WUJ3 1361 aa13.58□□□□□ -0.23
TNC-212ENST00000542877 ADGRA3Q8IWK6 1321 aa13.58□□□□□ -0.23
TNC-212ENST00000542877 KRT75O95678 551 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 CASP4P49662 377 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 BLVRAP53004 296 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 ARHGEF7Q14155 803 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 NOTUMQ6P988 496 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 SPOCD1Q6ZMY3 1216 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 SGF29Q96ES7 293 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 KLHL4Q9C0H6 718 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 EIF3LQ9Y262 564 aaKnown RBP13.58□□□□□ -0.24
TNC-212ENST00000542877 TSPOAP1O95153 1857 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 ATP6V1G2O95670 118 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 SERPINB5P36952 375 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 UBE3AQ05086 875 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 RASA2Q15283 850 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 TRIM16LQ309B1 348 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 SEL1L3Q68CR1 1132 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 MRNIPQ6NTE8 343 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 DENND5BQ6ZUT9 1274 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 PLEKHM3Q6ZWE6 761 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 CD302Q8IX05 232 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 PIDD1Q9HB75 910 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 PRR23D1E9PI22 279 aaPredicted RBP13.58□□□□□ -0.24
TNC-212ENST00000542877 SUPT7LO94864 414 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 ASMTLO95671 621 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 LSM8O95777 96 aaKnown RBP13.58□□□□□ -0.24
TNC-212ENST00000542877 GSNP06396 782 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 PRR23D2P0DMB1 279 aaPredicted RBP13.58□□□□□ -0.24
TNC-212ENST00000542877 SREBF1P36956 1147 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 TRMT5Q32P41 509 aaKnown RBP13.58□□□□□ -0.24
TNC-212ENST00000542877 NUDT18Q6ZVK8 323 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 HOMEZQ8IX15 550 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 STKLD1Q8NE28 680 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 GTF3C2Q8WUA4 911 aaPredicted RBP13.58□□□□□ -0.24
TNC-212ENST00000542877 HES6Q96HZ4 224 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 TMEM245Q9H330 911 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 OSGEPQ9NPF4 335 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 UBQLN1Q9UMX0 589 aaKnown RBP13.58□□□□□ -0.24
TNC-212ENST00000542877 TSC22D4Q9Y3Q8 395 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 DYNC1LI2O43237 492 aaPredicted RBP13.58□□□□□ -0.24
TNC-212ENST00000542877 TWF1Q12792 350 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 ZRANB3Q5FWF4 1079 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 WASHC2DQ5SRD0 308 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 TUBGCP3Q96CW5 907 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 TAAR1Q96RJ0 339 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 GPR63Q9BZJ6 419 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 DDX20Q9UHI6 824 aaKnown RBP13.58□□□□□ -0.24
TNC-212ENST00000542877 DNAJC16Q9Y2G8 782 aa13.58□□□□□ -0.24
TNC-212ENST00000542877 VWA5AO00534 786 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 PPP3CCP48454 512 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 RRN3P2A6NIE6 340 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 PIK3CDO00329 1044 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 NFIBO00712 420 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 MYCP01106 439 aaPredicted RBP13.57□□□□□ -0.24
TNC-212ENST00000542877 PGK2P07205 417 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 SLC2A3P11169 496 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 ST8SIA6P61647 398 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 CACHD1Q5VU97 1274 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 MICALL2Q8IY33 904 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 ELP3Q9H9T3 547 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 DPP3Q9NY33 737 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 RUVBL2Q9Y230 463 aaKnown RBP13.57□□□□□ -0.24
TNC-212ENST00000542877 V9GYQ6 96 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 UBE2Q2LH0YL09 131 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 M0QYT0 321 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 SKAP2O75563 359 aaPredicted RBP13.57□□□□□ -0.24
TNC-212ENST00000542877 RPS6KA5O75582 802 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 SERPINI2O75830 405 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 ICAM1P05362 532 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 NAMPTP43490 491 aa13.57□□□□□ -0.24
TNC-212ENST00000542877 WASHC5Q12768 1159 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms