RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 HMGA1P17096 107 aaKnown RBP11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 IGFBP4P22692 258 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 PGFP49763 221 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 MAP3K7CLP57077 242 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 BPIFB4P59827 614 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 CDK17Q00537 523 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 CCDC173Q0VFZ6 552 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 MTMR3Q13615 1198 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 BMS1Q14692 1282 aaKnown RBP11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 ASIC2Q16515 512 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 RAB41Q5JT25 222 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 TAF3Q5VWG9 929 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 PMF1Q6P1K2 205 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 VSTM1Q6UX27 236 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 DNAAF5Q86Y56 855 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 PASD1Q8IV76 773 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 DRC7Q8IY82 874 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 C12orf76Q8N812 135 aaPredicted RBP11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 SCAMP5Q8TAC9 235 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 SLC7A14Q8TBB6 771 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 GPR152Q8TDT2 470 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 HDAC7Q8WUI4 952 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 MSLNLQ96KJ4 702 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 UBXN6Q9BZV1 441 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 NUCKS1Q9H1E3 243 aaKnown RBP11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 S1PR5Q9H228 398 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 PLEKHA4Q9H4M7 779 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 TAS2R14Q9NYV8 317 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 IMPACTQ9P2X3 320 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 CDH22Q9UJ99 828 aa11.3□□□□□ -0.6
NPIPB3-210ENST00000542817 FAM92AA1XBS5 289 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 ZNF263O14978 683 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 SERPING1P05155 500 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 POU2F2P09086 479 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 FAM200BP0CF97 657 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 PLA2G4AP47712 749 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 TUFMP49411 452 aaKnown RBP11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 BCAT1P54687 386 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 NOMO3P69849 1222 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 TWF1Q12792 350 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 PTP4A2Q12974 167 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 MAPK8IP2Q13387 824 aaPredicted RBP11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 MGAT5BQ3V5L5 792 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 GREB1Q4ZG55 1949 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 TMEM150AQ86TG1 271 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 PIGZQ86VD9 579 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 ZNF677Q86XU0 584 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 TMC8Q8IU68 726 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 CNGA4Q8IV77 575 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 C1orf131Q8NDD1 294 aaKnown RBP11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 CMASQ8NFW8 434 aaPredicted RBP11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 SPATA17Q96L03 361 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 PANX2Q96RD6 677 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 CPXM1Q96SM3 734 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 SEPT5Q99719 369 aaPredicted RBP11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 MED10Q9BTT4 135 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 SLC4A5Q9BY07 1137 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 ZMYND15Q9H091 742 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 IL21Q9HBE4 155 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 USP3Q9Y6I4 520 aa11.29□□□□□ -0.6
NPIPB3-210ENST00000542817 PATJQ8NI35 1801 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 A0A087X0T9 212 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 FAM170AA1A519 330 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 M0QYV0 167 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 XPO1O14980 1071 aaKnown RBP11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 CCL16O15467 120 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 MOSPD3O75425 235 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 TADA3O75528 432 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 FAM228BP0C875 321 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 FOSL2P15408 326 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 HOXA9P31269 272 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 EIF4A3P38919 411 aaKnown RBP11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 PDE6CP51160 858 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 KIF11P52732 1056 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 KLHL30Q0D2K2 578 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 BST2Q10589 180 aaKnown RBP11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 PDCLQ13371 301 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 STILQ15468 1287 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 CLEC16AQ2KHT3 1053 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 PTPN20Q4JDL3 420 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 ANKRD54Q6NXT1 300 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 RTL10Q7L3V2 364 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 CCDC186Q7Z3E2 898 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 TMEM110Q86TL2 294 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 SCN4BQ8IWT1 228 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 ZNF397Q8NF99 534 aaPredicted RBP11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 GIPC2Q8TF65 315 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 STK32AQ8WU08 396 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 KCTD13Q8WZ19 329 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 NDRG1Q92597 394 aaKnown RBP11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 CASP10Q92851 521 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 KHSRPQ92945 711 aaKnown RBP eCLIP11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 PABPC5Q96DU9 382 aaKnown RBP11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 TRIM44Q96DX7 344 aaPredicted RBP11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 MYRFLQ96LU7 910 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 GAS2L1Q99501 681 aaPredicted RBP11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 TTLL2Q9BWV7 592 aa11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 ZNF334Q9HCZ1 680 aaPredicted RBP11.28□□□□□ -0.6
NPIPB3-210ENST00000542817 PNPLA8Q9NP80 782 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms