RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 RIMBP3BA6NNM3 1639 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 RIMBP3Q9UFD9 1639 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 ZSCAN9O15535 394 aaPredicted RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 SHOX2O60902 331 aaPredicted RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 PRKD3O94806 890 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 SPDEFO95238 335 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 U2AF1L5P0DN76 240 aaPredicted RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 SKILP12757 684 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 IL2RBP14784 551 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 GPR3P46089 330 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 AVPR1BP47901 424 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 GCLCP48506 637 aaPredicted RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 CCNHP51946 323 aaPredicted RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 SH3BGRP55822 239 aaPredicted RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 MXRA7P84157 204 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 U2AF1Q01081 240 aaKnown RBP eCLIP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 FAPQ12884 760 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 MALLQ13021 153 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 ERCC6LQ2NKX8 1250 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 ANO4Q32M45 955 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 GJC2Q5T442 439 aaPredicted RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 TTC22Q5TAA0 569 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 CPLX2Q6PUV4 134 aaKnown RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 LRRC8AQ8IWT6 810 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 RHOT2Q8IXI1 618 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 GBP7Q8N8V2 638 aaPredicted RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 CCDC150Q8NCX0 1101 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 ACRBPQ8NEB7 543 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 OR8K1Q8NGG5 319 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 WDR66Q8TBY9 1149 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 HOXB13Q92826 284 aaPredicted RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 ZKSCAN4Q969J2 545 aaPredicted RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 CCDC34Q96HJ3 373 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 ANKRD27Q96NW4 1050 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 JPH2Q9BR39 696 aaPredicted RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 FUT8Q9BYC5 575 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 API5Q9BZZ5 524 aaKnown RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 LANCL2Q9NS86 450 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 CCM2LQ9NUG4 571 aaPredicted RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 SYBUQ9NX95 663 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 MOCS1Q9NZB8 636 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 RGL1Q9NZL6 768 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 AJAP1Q9UKB5 411 aaPredicted RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 PCDHGA2Q9Y5H1 932 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 FAM208AQ9UK61 1670 aaKnown RBP6.44□□□□□ -1.38
XRCC4-206ENST00000542685 SPATA31D1Q6ZQQ2 1576 aa6.44□□□□□ -1.38
XRCC4-206ENST00000542685 MYO5BQ9ULV0 1848 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 RGS12O14924 1447 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 PXDNLA1KZ92 1463 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 SHTN1A0MZ66 631 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 PIPSLA2A3N6 862 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 SRRM3A6NNA2 597 aaPredicted RBP6.43□□□□□ -1.38
XRCC4-206ENST00000542685 MARCH11A6NNE9 402 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 HMGB1P1B2RPK0 211 aaPredicted RBP6.43□□□□□ -1.38
XRCC4-206ENST00000542685 KIAA0355O15063 1070 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 GPR39O43194 453 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 CFIP05156 583 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 FAM163BP0C2L3 166 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 FERP16591 822 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 ATP5JP18859 108 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 MCAMP43121 646 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 ALDH1A3P47895 512 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 SLC5A3P53794 718 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 NAP1L1P55209 391 aaKnown RBP6.43□□□□□ -1.38
XRCC4-206ENST00000542685 PSMC1P62191 440 aaKnown RBP6.43□□□□□ -1.38
XRCC4-206ENST00000542685 ROR2Q01974 943 aaKnown RBP6.43□□□□□ -1.38
XRCC4-206ENST00000542685 CCDC57Q2TAC2 916 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 LUZP1Q86V48 1076 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 MAPKAPK5Q8IW41 473 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 RPAP2Q8IXW5 612 aaPredicted RBP6.43□□□□□ -1.38
XRCC4-206ENST00000542685 DRC7Q8IY82 874 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 SAMD3Q8N6K7 520 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 FAM81AQ8TBF8 368 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 ASB10Q8WXI3 467 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 PPP1R14BQ96C90 147 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 ALS2CR12Q96Q35 445 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 MPHOSPH8Q99549 860 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 ZSWIM1Q9BR11 485 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 POLR3CQ9BUI4 534 aaPredicted RBP6.43□□□□□ -1.38
XRCC4-206ENST00000542685 MOV10L1Q9BXT6 1211 aaKnown RBP6.43□□□□□ -1.38
XRCC4-206ENST00000542685 REXO4Q9GZR2 422 aaKnown RBP6.43□□□□□ -1.38
XRCC4-206ENST00000542685 DCTPP1Q9H773 170 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 KLHL11Q9NVR0 708 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 EXOC6BQ9Y2D4 811 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 EPN1Q9Y6I3 576 aaPredicted RBP6.43□□□□□ -1.38
XRCC4-206ENST00000542685 KIAA0232Q92628 1395 aa6.43□□□□□ -1.38
XRCC4-206ENST00000542685 RIMS2Q9UQ26 1411 aa6.42□□□□□ -1.38
XRCC4-206ENST00000542685 ERICH2A1L162 156 aa6.42□□□□□ -1.38
XRCC4-206ENST00000542685 ZAR1LA6NP61 321 aa6.42□□□□□ -1.38
XRCC4-206ENST00000542685 GOLGA6L19H0YKK7 550 aa6.42□□□□□ -1.38
XRCC4-206ENST00000542685 KIAA0754O94854 1291 aa6.42□□□□□ -1.38
XRCC4-206ENST00000542685 POMCP01189 267 aa6.42□□□□□ -1.38
XRCC4-206ENST00000542685 HKR1P10072 659 aa6.42□□□□□ -1.38
XRCC4-206ENST00000542685 ITGAMP11215 1152 aa6.42□□□□□ -1.38
XRCC4-206ENST00000542685 VDRP11473 427 aa6.42□□□□□ -1.38
XRCC4-206ENST00000542685 FPR1P21462 350 aa6.42□□□□□ -1.38
XRCC4-206ENST00000542685 MCM3P25205 808 aa6.42□□□□□ -1.38
XRCC4-206ENST00000542685 GUCY1A2P33402 732 aa6.42□□□□□ -1.38
XRCC4-206ENST00000542685 SEC24CP53992 1094 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms