RNA–Protein interactions for RNA: ENST00000542675.1

PDE3A-202, Transcript of phosphodiesterase 3A, humanhuman

TSL 3

Gene PDE3A, Length 685 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-202ENST00000542675 TTC30AQ86WT1 665 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 DCP1BQ8IZD4 617 aaKnown RBP12.73□□□□□ -0.37
PDE3A-202ENST00000542675 PDCL2Q8N4E4 241 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 MDGA1Q8NFP4 955 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 USP33Q8TEY7 942 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 PIGKQ92643 395 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 TSPAN18Q96SJ8 248 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 PKMYT1Q99640 499 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 CCSER1Q9C0I3 900 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 ZDHHC4Q9NPG8 344 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 TMEM9BQ9NQ34 198 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 FSCN3Q9NQT6 498 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 KCND2Q9NZV8 630 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 GCNT4Q9P109 453 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 GTF3C4Q9UKN8 822 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 AGO2Q9UKV8 859 aaKnown RBP12.73□□□□□ -0.37
PDE3A-202ENST00000542675 ODF2LQ9ULJ1 636 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 L1RE1Q9UN81 338 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 DERAQ9Y315 318 aa12.73□□□□□ -0.37
PDE3A-202ENST00000542675 PCDH15Q96QU1 1955 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 ITPR1Q14643 2758 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 SRRM3A6NNA2 597 aaPredicted RBP12.72□□□□□ -0.37
PDE3A-202ENST00000542675 NOL4O94818 638 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 CKMP06732 381 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 ADSSP30520 456 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 POLR2BP30876 1174 aaKnown RBP12.72□□□□□ -0.37
PDE3A-202ENST00000542675 GTF2BQ00403 316 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 AMPD2Q01433 879 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 KARSQ15046 597 aaKnown RBP12.72□□□□□ -0.37
PDE3A-202ENST00000542675 CYP2U1Q7Z449 544 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 RASSF3Q86WH2 238 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 SH3RF2Q8TEC5 729 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 ACDQ96AP0 544 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 KIF2CQ99661 725 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 ASB7Q9H672 318 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 PARVGQ9HBI0 331 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 TMEM74BQ9NUR3 256 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 DDX43Q9NXZ2 648 aaKnown RBP12.72□□□□□ -0.37
PDE3A-202ENST00000542675 ZMYM5Q9UJ78 669 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 C2CD2Q9Y426 696 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 KNL1Q8NG31 2342 aa12.72□□□□□ -0.37
PDE3A-202ENST00000542675 ACACAQ13085 2346 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 ATXN2Q99700 1313 aaKnown RBP12.71□□□□□ -0.37
PDE3A-202ENST00000542675 PTPRBP23467 1997 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 TRAV19A0A0A6YYK7 116 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 SPAARA0A1B0GVQ0 90 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 HYAL3O43820 417 aaPredicted RBP12.71□□□□□ -0.37
PDE3A-202ENST00000542675 ATP2C2O75185 946 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 USP17L7P0C7H9 530 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 PLCG1P19174 1290 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 PAX3P23760 479 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 SLC6A11P48066 632 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 TSPY1Q01534 308 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 KCNA1Q09470 495 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 SMARCB1Q12824 385 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 SV2CQ496J9 727 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 USP39Q53GS9 565 aaKnown RBP12.71□□□□□ -0.37
PDE3A-202ENST00000542675 INTS6LQ5JSJ4 861 aaKnown RBP12.71□□□□□ -0.37
PDE3A-202ENST00000542675 EMC10Q5UCC4 262 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 SCN4BQ8IWT1 228 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 ATP2A3Q93084 1043 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 FNBP1Q96RU3 617 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 AGAP1Q9UPQ3 857 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 STYXL1Q9Y6J8 313 aa12.71□□□□□ -0.37
PDE3A-202ENST00000542675 GOLGA4Q13439 2230 aaKnown RBP12.7□□□□□ -0.38
PDE3A-202ENST00000542675 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.7□□□□□ -0.38
PDE3A-202ENST00000542675 ITGB3P05106 788 aa12.7□□□□□ -0.38
PDE3A-202ENST00000542675 KRT18P05783 430 aaKnown RBP12.7□□□□□ -0.38
PDE3A-202ENST00000542675 CEACAM1P13688 526 aa12.7□□□□□ -0.38
PDE3A-202ENST00000542675 CSRP1P21291 193 aaKnown RBP12.7□□□□□ -0.38
PDE3A-202ENST00000542675 PTGER3P43115 390 aa12.7□□□□□ -0.38
PDE3A-202ENST00000542675 MAPK8P45983 427 aa12.7□□□□□ -0.38
PDE3A-202ENST00000542675 USP46P62068 366 aa12.7□□□□□ -0.38
PDE3A-202ENST00000542675 TFAMQ00059 246 aaKnown RBP12.7□□□□□ -0.38
PDE3A-202ENST00000542675 NFE2Q16621 373 aaPredicted RBP12.7□□□□□ -0.38
PDE3A-202ENST00000542675 TMEFF1Q8IYR6 380 aa12.7□□□□□ -0.38
PDE3A-202ENST00000542675 ALLCQ8N6M5 410 aa12.7□□□□□ -0.38
PDE3A-202ENST00000542675 C1orf127Q8N9H9 656 aa12.7□□□□□ -0.38
PDE3A-202ENST00000542675 CXorf38Q8TB03 319 aa12.7□□□□□ -0.38
PDE3A-202ENST00000542675 LEO1Q8WVC0 666 aaPredicted RBP12.7□□□□□ -0.38
PDE3A-202ENST00000542675 ZCCHC14Q8WYQ9 949 aaKnown RBP12.7□□□□□ -0.38
PDE3A-202ENST00000542675 RAD54LQ92698 747 aa12.7□□□□□ -0.38
PDE3A-202ENST00000542675 SAAL1Q96ER3 474 aa12.7□□□□□ -0.38
PDE3A-202ENST00000542675 TRMT2BQ96GJ1 504 aaKnown RBP12.7□□□□□ -0.38
PDE3A-202ENST00000542675 CNOT6LQ96LI5 555 aaKnown RBP12.7□□□□□ -0.38
PDE3A-202ENST00000542675 MYRFLQ96LU7 910 aa12.7□□□□□ -0.38
PDE3A-202ENST00000542675 ZSCAN31Q96LW9 406 aaPredicted RBP12.7□□□□□ -0.38
PDE3A-202ENST00000542675 TMEM206Q9H813 350 aa12.7□□□□□ -0.38
PDE3A-202ENST00000542675 MBD1Q9UIS9 605 aaPredicted RBP12.7□□□□□ -0.38
PDE3A-202ENST00000542675 KLK13Q9UKR3 277 aa12.7□□□□□ -0.38
PDE3A-202ENST00000542675 MMP17Q9ULZ9 603 aa12.7□□□□□ -0.38
PDE3A-202ENST00000542675 GOLGA8IPA6NC78 632 aa12.69□□□□□ -0.38
PDE3A-202ENST00000542675 GOLGA8JA6NMD2 632 aa12.69□□□□□ -0.38
PDE3A-202ENST00000542675 SOBPA7XYQ1 873 aa12.69□□□□□ -0.38
PDE3A-202ENST00000542675 SGK1O00141 431 aa12.69□□□□□ -0.38
PDE3A-202ENST00000542675 CYP17A1P05093 508 aa12.69□□□□□ -0.38
PDE3A-202ENST00000542675 HDCP19113 662 aa12.69□□□□□ -0.38
PDE3A-202ENST00000542675 RPL10AP62906 217 aaKnown RBP12.69□□□□□ -0.38
PDE3A-202ENST00000542675 FAM193AP78312 1265 aa12.69□□□□□ -0.38
PDE3A-202ENST00000542675 RING1Q06587 406 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms