RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 SETDB1Q15047 1291 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 SLC39A12Q504Y0 691 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 NPNTQ6UXI9 565 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 ANKRD7Q92527 254 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 LBHD1Q9BQE6 289 aaPredicted RBP10.61□□□□□ -0.71
TOP3A-208ENST00000542570 PDZD7Q9H5P4 517 aa10.61□□□□□ -0.71
TOP3A-208ENST00000542570 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.61□□□□□ -0.71
TOP3A-208ENST00000542570 DIS3Q9Y2L1 958 aaKnown RBP10.61□□□□□ -0.71
TOP3A-208ENST00000542570 USP12O75317 370 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 LMO2P25791 158 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 CCND3P30281 292 aaPredicted RBP10.6□□□□□ -0.71
TOP3A-208ENST00000542570 GRK4P32298 578 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 TAS2R40P59535 323 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 MRPS6P82932 125 aaKnown RBP10.6□□□□□ -0.71
TOP3A-208ENST00000542570 PRPSAP1Q14558 356 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 HIF1AQ16665 826 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 PPP1R2P3Q6NXS1 205 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 TMC7Q7Z402 723 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 CTU1Q7Z7A3 348 aaKnown RBP10.6□□□□□ -0.71
TOP3A-208ENST00000542570 SAPCD2Q86UD0 394 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 ULBP1Q9BZM6 244 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 TTYH3Q9C0H2 523 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 SEMA4AQ9H3S1 761 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 SARS2Q9NP81 518 aaKnown RBP10.6□□□□□ -0.71
TOP3A-208ENST00000542570 FAM105AQ9NUU6 356 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 COG5Q9UP83 839 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 RPTORQ8N122 1335 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 ARHGEF37A1IGU5 675 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 TSPAN1O60635 241 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 MSCO60682 206 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 C4BPAP04003 597 aaKnown RBP10.6□□□□□ -0.71
TOP3A-208ENST00000542570 BEND6Q5SZJ8 279 aaPredicted RBP10.6□□□□□ -0.71
TOP3A-208ENST00000542570 TTC30AQ86WT1 665 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 ZNF677Q86XU0 584 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 DPEP3Q9H4B8 488 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 DMAC2Q9NW81 257 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 DNPEPQ9ULA0 475 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 MYH1P12882 1939 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 SCN9AQ15858 1988 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 APOEP02649 317 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 FGFR1P11362 822 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 ODC1P11926 461 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 MBTD1Q05BQ5 628 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 MAMLD1Q13495 774 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 PIGZQ86VD9 579 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 ZNF410Q86VK4 478 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 TTC13Q8NBP0 860 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 LRRC8CQ8TDW0 803 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 SREK1Q8WXA9 508 aaKnown RBP10.6□□□□□ -0.71
TOP3A-208ENST00000542570 CPXM1Q96SM3 734 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 FUT8Q9BYC5 575 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 PTPRJQ12913 1337 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 TNRC6CQ9HCJ0 1690 aaKnown RBP10.6□□□□□ -0.71
TOP3A-208ENST00000542570 CA12O43570 354 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 CRCPO75575 148 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 SASH3O75995 380 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 SP100P23497 879 aaPredicted RBP10.6□□□□□ -0.71
TOP3A-208ENST00000542570 PRKCIP41743 596 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 WNT7BP56706 349 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 GABPB1Q06547 395 aaPredicted RBP10.6□□□□□ -0.71
TOP3A-208ENST00000542570 SPARCL1Q14515 664 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 CHSY1Q86X52 802 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 CDKL2Q92772 493 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 DPF3Q92784 378 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 ATP2A3Q93084 1043 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 SIX2Q9NPC8 291 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 DDX56Q9NY93 547 aaKnown RBP10.6□□□□□ -0.71
TOP3A-208ENST00000542570 XPO7Q9UIA9 1087 aaKnown RBP10.6□□□□□ -0.71
TOP3A-208ENST00000542570 DCTN4Q9UJW0 460 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 ITGA11Q9UKX5 1188 aa10.6□□□□□ -0.71
TOP3A-208ENST00000542570 TYW5A2RUC4 315 aaKnown RBP10.59□□□□□ -0.71
TOP3A-208ENST00000542570 H3BRJ5 948 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 GBP1P32455 592 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 MNAT1P51948 309 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 SKIV2LQ15477 1246 aaKnown RBP10.59□□□□□ -0.71
TOP3A-208ENST00000542570 DDR2Q16832 855 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 FAM133BQ5BKY9 247 aaKnown RBP10.59□□□□□ -0.71
TOP3A-208ENST00000542570 ZC3H12AQ5D1E8 599 aaKnown RBP10.59□□□□□ -0.71
TOP3A-208ENST00000542570 ANKRD20A3Q5VUR7 823 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 C3orf62Q6ZUJ4 267 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 IPMKQ8NFU5 416 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 RAPGEF5Q92565 580 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 UNKQ9C0B0 810 aaKnown RBP10.59□□□□□ -0.71
TOP3A-208ENST00000542570 CYP4F11Q9HBI6 524 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 TSPAN3O60637 253 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 PNPLA4P41247 253 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 BCAT1P54687 386 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 POU5F1BQ06416 359 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 PTPN20Q4JDL3 420 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 LDLRAD1Q5T700 205 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 CST9Q5W186 159 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 ALS2CLQ60I27 953 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 CES3Q6UWW8 571 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 OTOP2Q7RTS6 562 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 ATP11CQ8NB49 1132 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 FBXO32Q969P5 355 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 RMDN1Q96DB5 314 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 PPP1R36Q96LQ0 422 aa10.59□□□□□ -0.71
TOP3A-208ENST00000542570 RPRD1AQ96P16 312 aaPredicted RBP10.59□□□□□ -0.71
TOP3A-208ENST00000542570 EPAS1Q99814 870 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms