RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 TRUB2O95900 331 aaKnown RBP6.86□□□□□ -1.31
PTPRO-208ENST00000542557 ITGBL1O95965 494 aaPredicted RBP6.86□□□□□ -1.31
PTPRO-208ENST00000542557 MIPP30301 263 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 PHBP35232 272 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 PLCB3Q01970 1234 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 ACVR2BQ13705 512 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 MTFR1Q15390 333 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 SMTNL2Q2TAL5 461 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 SLC10A6Q3KNW5 377 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 SWT1Q5T5J6 900 aaKnown RBP6.86□□□□□ -1.31
PTPRO-208ENST00000542557 CYB5D1Q6P9G0 228 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 LCLAT1Q6UWP7 414 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 VSIG1Q86XK7 387 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 DENND1AQ8TEH3 1009 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 USP6NLQ92738 828 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 OPTNQ96CV9 577 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 HPDLQ96IR7 371 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 ZNF668Q96K58 619 aaPredicted RBP6.86□□□□□ -1.31
PTPRO-208ENST00000542557 FDXACB1Q9BRP7 624 aaPredicted RBP6.86□□□□□ -1.31
PTPRO-208ENST00000542557 HAUS2Q9NVX0 235 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 PNMA3Q9UL41 463 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 ZMYND8Q9ULU4 1186 aaPredicted RBP6.86□□□□□ -1.31
PTPRO-208ENST00000542557 CLUHO75153 1309 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 STK25O00506 426 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 DPYSL4O14531 572 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 MCF2LO15068 1137 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 IFNB1P01574 187 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 ARF4P18085 180 aaPredicted RBP6.86□□□□□ -1.31
PTPRO-208ENST00000542557 TAC1P20366 129 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 GPD1P21695 349 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 GDF10P55107 478 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 RBP5P82980 135 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 PDIA2Q13087 525 aaKnown RBP6.86□□□□□ -1.31
PTPRO-208ENST00000542557 NOMO1Q15155 1222 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 KLHL38Q2WGJ6 581 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 ZNF792Q3KQV3 632 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 GALNTL6Q49A17 601 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 KCNT1Q5JUK3 1230 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 FAM102AQ5T9C2 384 aaPredicted RBP6.86□□□□□ -1.31
PTPRO-208ENST00000542557 WDR78Q5VTH9 848 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 RNF43Q68DV7 783 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 TAPT1Q6NXT6 567 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 ILDR2Q71H61 639 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 ZNF467Q7Z7K2 595 aaPredicted RBP6.86□□□□□ -1.31
PTPRO-208ENST00000542557 EMC1Q8N766 993 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 KCTD6Q8NC69 237 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 GDAP1Q8TB36 358 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 RSAD2Q8WXG1 361 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 ADPGKQ9BRR6 497 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 CNPY3Q9BT09 278 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 DHRS4Q9BTZ2 278 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 TRABDQ9H4I3 376 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 VPS37BQ9H9H4 285 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 ABCF3Q9NUQ8 709 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 USP18Q9UMW8 372 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 AKT3Q9Y243 479 aa6.86□□□□□ -1.31
PTPRO-208ENST00000542557 C2CD4BA6NLJ0 364 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 TSPAN1O60635 241 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 CAPN15O75808 1086 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 SETSIPP0DME0 302 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 HOXD8P13378 290 aaPredicted RBP6.85□□□□□ -1.31
PTPRO-208ENST00000542557 RPL22P35268 128 aaKnown RBP6.85□□□□□ -1.31
PTPRO-208ENST00000542557 GRM5P41594 1212 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 WDR4P57081 412 aaKnown RBP6.85□□□□□ -1.31
PTPRO-208ENST00000542557 GEMIN4P57678 1058 aaKnown RBP6.85□□□□□ -1.31
PTPRO-208ENST00000542557 GPX6P59796 221 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 DYNLT1P63172 113 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 CCNA1P78396 465 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 CCDC15Q0P6D6 951 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 TFDP2Q14188 446 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 SPARCL1Q14515 664 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 DCAF4L1Q3SXM0 396 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 FAM47CQ5HY64 1035 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 MAMDC4Q6UXC1 1216 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 ZNF410Q86VK4 478 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 RFX6Q8HWS3 928 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 MAGEC3Q8TD91 643 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 ZBTB10Q96DT7 871 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 SMC6Q96SB8 1091 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 ACSS3Q9H6R3 686 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 AGAP1Q9UPQ3 857 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 DERAQ9Y315 318 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 CITO14578 2027 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 A0A1B0GUA9 196 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 FOXO6A8MYZ6 492 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 ZNF487B1APH4 448 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 TYROBPO43914 113 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 MGRN1O60291 552 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 CD48P09326 243 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 STIP1P31948 543 aaKnown RBP6.85□□□□□ -1.31
PTPRO-208ENST00000542557 NDST1P52848 882 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 EIF3EP60228 445 aaKnown RBP6.85□□□□□ -1.31
PTPRO-208ENST00000542557 IGBP1P78318 339 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 ORC1Q13415 861 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 SNAPC2Q13487 334 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 PKN2Q16513 984 aaKnown RBP6.85□□□□□ -1.31
PTPRO-208ENST00000542557 PDK4Q16654 411 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 ANKRD22Q5VYY1 191 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 CGB2Q6NT52 195 aa6.85□□□□□ -1.31
PTPRO-208ENST00000542557 MTHFD1LQ6UB35 978 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms