RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 DMGDHQ9UI17 866 aaKnown RBP11.6□□□□□ -0.55
SCG3-202ENST00000542355 LCMT1Q9UIC8 334 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 ATP11BQ9Y2G3 1177 aa11.6□□□□□ -0.55
SCG3-202ENST00000542355 TARSL2A2RTX5 802 aaKnown RBP11.59□□□□□ -0.55
SCG3-202ENST00000542355 GRXCR2A6NFK2 248 aa11.59□□□□□ -0.55
SCG3-202ENST00000542355 CCDC188H7C350 402 aa11.59□□□□□ -0.55
SCG3-202ENST00000542355 PSTPIP1O43586 416 aa11.59□□□□□ -0.55
SCG3-202ENST00000542355 BEST1O76090 585 aa11.59□□□□□ -0.55
SCG3-202ENST00000542355 HSPA8P11142 646 aaKnown RBP11.59□□□□□ -0.55
SCG3-202ENST00000542355 COL6A1P12109 1028 aa11.59□□□□□ -0.55
SCG3-202ENST00000542355 LCP1P13796 627 aa11.59□□□□□ -0.55
SCG3-202ENST00000542355 LBX1P52954 281 aa11.59□□□□□ -0.55
SCG3-202ENST00000542355 DSC1Q08554 894 aa11.59□□□□□ -0.55
SCG3-202ENST00000542355 ZFYVE27Q5T4F4 411 aa11.59□□□□□ -0.55
SCG3-202ENST00000542355 PAQR9Q6ZVX9 377 aa11.59□□□□□ -0.55
SCG3-202ENST00000542355 PLVAPQ9BX97 442 aa11.59□□□□□ -0.55
SCG3-202ENST00000542355 DUSP16Q9BY84 665 aa11.59□□□□□ -0.55
SCG3-202ENST00000542355 DNAJB4Q9UDY4 337 aa11.59□□□□□ -0.55
SCG3-202ENST00000542355 CDH9Q9ULB4 789 aa11.59□□□□□ -0.55
SCG3-202ENST00000542355 LRFN2Q9ULH4 789 aa11.59□□□□□ -0.55
SCG3-202ENST00000542355 PDCD11Q14690 1871 aaKnown RBP11.59□□□□□ -0.55
SCG3-202ENST00000542355 TCRBV7S2A1N4TA0A589 114 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 M0QZQ0 153 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 PAPSS1O43252 624 aaPredicted RBP11.58□□□□□ -0.56
SCG3-202ENST00000542355 SART1O43290 800 aaKnown RBP11.58□□□□□ -0.56
SCG3-202ENST00000542355 TUBBP07437 444 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 GJA8P48165 433 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 GATMP50440 423 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 SLC8A3P57103 927 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 SNX16P57768 344 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 SLC6A3Q01959 620 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 CLUL1Q15846 466 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 GLE1Q53GS7 698 aaKnown RBP11.58□□□□□ -0.56
SCG3-202ENST00000542355 WDR93Q6P2C0 686 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 SLC13A5Q86YT5 568 aaPredicted RBP11.58□□□□□ -0.56
SCG3-202ENST00000542355 COLGALT2Q8IYK4 626 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 NIPA2Q8N8Q9 360 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 FNIP1Q8TF40 1166 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 ARMC5Q96C12 935 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 PCED1BQ96HM7 432 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 PRG3Q9Y2Y8 225 aaPredicted RBP11.58□□□□□ -0.56
SCG3-202ENST00000542355 GOLGA6L10A0A0M3HER8 536 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.58□□□□□ -0.56
SCG3-202ENST00000542355 ZRANB2O95218 330 aaKnown RBP eCLIP11.58□□□□□ -0.56
SCG3-202ENST00000542355 PDGFRAP16234 1089 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 PCSK1P29120 753 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 BRD3Q15059 726 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 KCTD19Q17RG1 926 aaPredicted RBP11.58□□□□□ -0.56
SCG3-202ENST00000542355 C1orf53Q5VUE5 145 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 TXNRD3NBQ6F5E7 133 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 OLFML1Q6UWY5 402 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 PIGZQ86VD9 579 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 CCDC50Q8IVM0 306 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 ZDHHC14Q8IZN3 488 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 ARFGAP1Q8N6T3 406 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 CLEC4CQ8WTT0 213 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 RXFP2Q8WXD0 754 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 PAWRQ96IZ0 340 aaKnown RBP11.58□□□□□ -0.56
SCG3-202ENST00000542355 SUSD3Q96L08 255 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 HSFY1Q96LI6 401 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 CASD1Q96PB1 797 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 RTP3Q9BQQ7 232 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 TMEM39AQ9NV64 488 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 KLHL11Q9NVR0 708 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 DSEQ9UL01 958 aa11.58□□□□□ -0.56
SCG3-202ENST00000542355 CCDC151A5D8V7 595 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 C2CD4BA6NLJ0 364 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 XPO1O14980 1071 aaKnown RBP11.57□□□□□ -0.56
SCG3-202ENST00000542355 RAD51CO43502 376 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 LRCH4O75427 683 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 SEC31AO94979 1220 aaKnown RBP11.57□□□□□ -0.56
SCG3-202ENST00000542355 PARNO95453 639 aaKnown RBP11.57□□□□□ -0.56
SCG3-202ENST00000542355 CXCL10P02778 98 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 CYP11A1P05108 521 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 GLI1P08151 1106 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 NPR3P17342 541 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 GPD1P21695 349 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 PAX3P23760 479 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 FLT3P36888 993 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 PLA2G4AP47712 749 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 ZNF143P52747 638 aaPredicted RBP11.57□□□□□ -0.56
SCG3-202ENST00000542355 MAP3K7CLP57077 242 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 PLCB3Q01970 1234 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 SMC1AQ14683 1233 aaKnown RBP11.57□□□□□ -0.56
SCG3-202ENST00000542355 OVOS1Q6IE37 1185 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 TRNP1Q6NT89 227 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 TMCO3Q6UWJ1 677 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 ZDHHC17Q8IUH5 632 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 KATNAL2Q8IYT4 538 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 MYCBPAPQ8TBZ2 947 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 KHSRPQ92945 711 aaKnown RBP eCLIP11.57□□□□□ -0.56
SCG3-202ENST00000542355 ACBD6Q9BR61 282 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 HEMGNQ9BXL5 484 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 STIM2Q9P246 746 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 AMACRQ9UHK6 382 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 PI4K2BG5E9Z4 385 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 TADA2AO75478 443 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 RNF8O76064 485 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 FAM200BP0CF97 657 aa11.57□□□□□ -0.56
SCG3-202ENST00000542355 RARAP10276 462 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms