RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 EXOC3O60645 756 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 OLFM2O95897 454 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 EGFP01133 1207 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 USP17L7P0C7H9 530 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 HDCP19113 662 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 ATICP31939 592 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 GJA4P35212 333 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 GRIK1P39086 918 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 MCCD1P59942 119 aaPredicted RBP12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 NOP14P78316 857 aaKnown RBP12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 CYP27A1Q02318 531 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 USP4Q13107 963 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 MTF1Q14872 753 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 PDGFRLQ15198 375 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 MAPRE1Q15691 268 aaKnown RBP12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 GAB4Q2WGN9 574 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 MDH1BQ5I0G3 518 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 DENND5BQ6ZUT9 1274 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 ERMP1Q7Z2K6 904 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 OR6B3Q8NGW1 331 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 OSCP1Q8WVF1 389 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 ZNF518BQ9C0D4 1074 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 ECT2Q9H8V3 914 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 IL37Q9NZH6 218 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 ARHGAP26Q9UNA1 814 aa12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 R3HCC1Q9Y3T6 440 aaKnown RBP12.6□□□□□ -0.39
CLSTN3-211ENST00000541667 TRAV19A0A0A6YYK7 116 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 ANTXRLA6NF34 631 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 PDXKO00764 312 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 TNFRSF10BO14763 440 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 HSP90AA1P07900 732 aaKnown RBP12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 PRR29P0C7W0 189 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 NDUFA8P51970 172 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 FOXK2Q01167 660 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 LONP2Q86WA8 852 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 CEP57L1Q8IYX8 460 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 B3GALNT2Q8NCR0 500 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 GOLGA5Q8TBA6 731 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 SH3RF2Q8TEC5 729 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 KCNK16Q96T55 309 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 SNX25Q9H3E2 840 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 SMYD3Q9H7B4 428 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 TRPC7Q9HCX4 862 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 NXF1Q9UBU9 619 aaKnown RBP12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 WNT6Q9Y6F9 365 aa12.59□□□□□ -0.39
CLSTN3-211ENST00000541667 SDK1Q7Z5N4 2213 aa12.58□□□□□ -0.39
CLSTN3-211ENST00000541667 A8MXQ7 604 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 RPN1P04843 607 aaKnown RBP12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 CKMP06732 381 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 CHRM1P11229 460 aaPredicted RBP12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 PFKLP17858 780 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 RAP1GAPP47736 663 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 AP3M2P53677 418 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 SLC7A9P82251 487 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 DPYDQ12882 1025 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 TAF10Q12962 218 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 TRPC3Q13507 836 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 NCOA4Q13772 614 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 PPP2R5DQ14738 602 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 LPAL2Q16609 132 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 ZACNQ401N2 412 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 SV2AQ7L0J3 742 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 WDR5BQ86VZ2 330 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 ADGRG2Q8IZP9 1017 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 FSIP1Q8NA03 581 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 SYAP1Q96A49 352 aaPredicted RBP12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 DUS2Q9NX74 493 aaKnown RBP12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 NCDNQ9UBB6 729 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 USP25Q9UHP3 1055 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 TRAF3IP3Q9Y228 551 aa12.58□□□□□ -0.4
CLSTN3-211ENST00000541667 FAM92AA1XBS5 289 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 LEFTY2O00292 366 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 IKBKBO14920 756 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 TRIM66O15016 1216 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 BEST1O76090 585 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 RHOBTB3O94955 611 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 OAS1P00973 400 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 NR3C1P04150 777 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 MYL1P05976 194 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 DRD1P21728 446 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 CNR2P34972 360 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 PGFP49763 221 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 TNNC1P63316 161 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 GRSF1Q12849 480 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 PUM1Q14671 1186 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 RSPO4Q2I0M5 234 aaPredicted RBP12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 SNX30Q5VWJ9 437 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 HEATR6Q6AI08 1181 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 CC2D1AQ6P1N0 951 aaPredicted RBP12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 FUKQ8N0W3 1084 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 CRYBG2Q8N1P7 616 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 ZMIZ2Q8NF64 920 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 SCAMP5Q8TAC9 235 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 TMC2Q8TDI7 906 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 SPATA32Q96LK8 384 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 P2RY13Q9BPV8 354 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 HINFPQ9BQA5 517 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 GOLPH3LQ9H4A5 285 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 TRPM5Q9NZQ8 1165 aa12.57□□□□□ -0.4
CLSTN3-211ENST00000541667 CCDC163A0A0D9SF12 145 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms