RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 PTCD3Q96EY7 689 aaKnown RBP4.93□□□□□ -1.62
SNHG1-217ENST00000541578 SENP7Q9BQF6 1050 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 COLEC11Q9BWP8 271 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 BRIP1Q9BX63 1249 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 SYNPO2LQ9H987 977 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 UNKLQ9H9P5 680 aaKnown RBP4.93□□□□□ -1.62
SNHG1-217ENST00000541578 JKAMPQ9P055 326 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 ZNF69Q9UC07 566 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 FBXO9Q9UK97 447 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-217ENST00000541578 ITGB1BP2Q9UKP3 347 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 PCDHGB3Q9Y5G1 929 aa4.93□□□□□ -1.62
SNHG1-217ENST00000541578 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.93□□□□□ -1.62
SNHG1-217ENST00000541578 ABCC2Q92887 1545 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 ZAR1LA6NP61 321 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 MYO1FO00160 1098 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 KIAA0355O15063 1070 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 IRAK2O43187 625 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 THP07101 528 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 FCER1AP12319 257 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 IDEP14735 1019 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 NPR1P16066 1061 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 EN2P19622 333 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-217ENST00000541578 EEF1GP26641 437 aaKnown RBP4.92□□□□□ -1.62
SNHG1-217ENST00000541578 CXCR5P32302 372 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 DDIT3P35638 169 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 HSPA7P48741 367 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 ALDH9A1P49189 494 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 VAV2P52735 878 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 TUBB8Q3ZCM7 444 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 RNF44Q7L0R7 432 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 MPP5Q8N3R9 675 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 ATG16L2Q8NAA4 619 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 FANCBQ8NB91 859 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 DMRTA2Q96SC8 542 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 AIFM2Q9BRQ8 373 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 TTLL2Q9BWV7 592 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 EIF2AQ9BY44 585 aaKnown RBP4.92□□□□□ -1.62
SNHG1-217ENST00000541578 RRN3Q9NYV6 651 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 SWAP70Q9UH65 585 aa4.92□□□□□ -1.62
SNHG1-217ENST00000541578 SETD1BQ9UPS6 1966 aaKnown RBP4.92□□□□□ -1.62
SNHG1-217ENST00000541578 TRGV11A0A075B6L2 103 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 HNRNPDLO14979 420 aaKnown RBP4.91□□□□□ -1.62
SNHG1-217ENST00000541578 PRDX5P30044 214 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 MAN1A1P33908 653 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 ZNF844Q08AG5 666 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 SLC13A2Q13183 592 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 GEN1Q17RS7 908 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 MPEG1Q2M385 716 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 C3orf38Q5JPI3 329 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 L1TD1Q5T7N2 865 aaKnown RBP4.91□□□□□ -1.62
SNHG1-217ENST00000541578 LMBRD2Q68DH5 695 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-217ENST00000541578 SP5Q6BEB4 398 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-217ENST00000541578 Q6ZNX1 250 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 ZNF365Q70YC5 407 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 SESTD1Q86VW0 696 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 PPP1R3BQ86XI6 285 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 SDR16C5Q8N3Y7 309 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 Q8NA96 180 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 PPHLN1Q8NEY8 458 aaKnown RBP4.91□□□□□ -1.62
SNHG1-217ENST00000541578 TRAPPC12Q8WVT3 735 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 KBTBD7Q8WVZ9 684 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 RUBCNQ92622 972 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 MPP4Q96JB8 637 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 MSLNLQ96KJ4 702 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 ZSCAN31Q96LW9 406 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-217ENST00000541578 TBATAQ96M53 351 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 P2RX7Q99572 595 aaKnown RBP4.91□□□□□ -1.62
SNHG1-217ENST00000541578 TLR10Q9BXR5 811 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 MRPL46Q9H2W6 279 aaKnown RBP4.91□□□□□ -1.62
SNHG1-217ENST00000541578 DACT1Q9NYF0 836 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 CFAP97Q9P2B7 532 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 SLC39A10Q9ULF5 831 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 CDYLQ9Y232 598 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 UHRF1BP1LA0JNW5 1464 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 CUL7Q14999 1698 aa4.91□□□□□ -1.62
SNHG1-217ENST00000541578 PPRC1Q5VV67 1664 aaKnown RBP4.91□□□□□ -1.62
SNHG1-217ENST00000541578 MAP3K4Q9Y6R4 1608 aa4.9□□□□□ -1.62
SNHG1-217ENST00000541578 A0A1W2PS29 197 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 GOLGA6L3A6NEY3 463 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 BTN3A1O00481 513 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 EPB41L2O43491 1005 aaKnown RBP4.9□□□□□ -1.63
SNHG1-217ENST00000541578 RASSF9O75901 435 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 AHSGP02765 367 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 ANXA2P07355 339 aaKnown RBP4.9□□□□□ -1.63
SNHG1-217ENST00000541578 MYL4P12829 197 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 FGFR2P21802 821 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 PLA2G5P39877 138 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 CASP2P42575 452 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 ARFIP2P53365 341 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 RPS16P62249 146 aaKnown RBP4.9□□□□□ -1.63
SNHG1-217ENST00000541578 EXOSC9Q06265 439 aaKnown RBP4.9□□□□□ -1.63
SNHG1-217ENST00000541578 TBX2Q13207 712 aaPredicted RBP4.9□□□□□ -1.63
SNHG1-217ENST00000541578 SLC35G1Q2M3R5 365 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 ZACNQ401N2 412 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 ANKRD45Q5TZF3 282 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 CLNKQ7Z7G1 428 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 ZNF575Q86XF7 245 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 CLASRPQ8N2M8 674 aaKnown RBP4.9□□□□□ -1.63
SNHG1-217ENST00000541578 LNX2Q8N448 690 aa4.9□□□□□ -1.63
SNHG1-217ENST00000541578 SLC17A8Q8NDX2 589 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms