RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 GKN1Q9NS71 199 aa21.35■■□□□ 1.01
ATN1-204ENST00000541029 AKAP3O75969 853 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 TRIM49P0CI25 452 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 TRIM49CP0CI26 452 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 PIK3CAP42336 1068 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 FAM160A1Q05DH4 1040 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 USP4Q13107 963 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 ZNF77Q15935 545 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 NFIL3Q16649 462 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 ZCWPW2Q504Y3 356 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 SPOPLQ6IQ16 392 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 SV2AQ7L0J3 742 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 FMR1NBQ8N0W7 255 aaPredicted RBP21.34■■□□□ 1.01
ATN1-204ENST00000541029 ARL14EPQ8N8R7 260 aaPredicted RBP21.34■■□□□ 1.01
ATN1-204ENST00000541029 C8orf48Q96LL4 319 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 CEP295NLQ96MC4 621 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 IER2Q9BTL4 223 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 SEMA4AQ9H3S1 761 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 EBF3Q9H4W6 596 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 GCNT4Q9P109 453 aa21.34■■□□□ 1.01
ATN1-204ENST00000541029 MAPK13O15264 365 aa21.33■■□□□ 1.01
ATN1-204ENST00000541029 HLA-DRAP01903 254 aa21.33■■□□□ 1.01
ATN1-204ENST00000541029 LMNAP02545 664 aaKnown RBP21.33■■□□□ 1.01
ATN1-204ENST00000541029 USP17L7P0C7H9 530 aa21.33■■□□□ 1.01
ATN1-204ENST00000541029 ARSAP15289 507 aa21.33■■□□□ 1.01
ATN1-204ENST00000541029 VAMP7P51809 220 aa21.33■■□□□ 1.01
ATN1-204ENST00000541029 NUCB2P80303 420 aa21.33■■□□□ 1.01
ATN1-204ENST00000541029 LRRC32Q14392 662 aa21.33■■□□□ 1.01
ATN1-204ENST00000541029 GAS6Q14393 721 aa21.33■■□□□ 1.01
ATN1-204ENST00000541029 MTF1Q14872 753 aa21.33■■□□□ 1.01
ATN1-204ENST00000541029 Q6ZS52 159 aa21.33■■□□□ 1.01
ATN1-204ENST00000541029 TTLL2Q9BWV7 592 aa21.33■■□□□ 1.01
ATN1-204ENST00000541029 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.33■■□□□ 1.01
ATN1-204ENST00000541029 HMGXB4Q9UGU5 601 aa21.33■■□□□ 1.01
ATN1-204ENST00000541029 GPR179Q6PRD1 2367 aa21.33■■□□□ 1
ATN1-204ENST00000541029 OTOL1A6NHN0 477 aaPredicted RBP21.32■■□□□ 1
ATN1-204ENST00000541029 IKBKBO14920 756 aa21.32■■□□□ 1
ATN1-204ENST00000541029 KINO60870 393 aaKnown RBP21.32■■□□□ 1
ATN1-204ENST00000541029 ASPAP45381 313 aa21.32■■□□□ 1
ATN1-204ENST00000541029 NOP14P78316 857 aaKnown RBP21.32■■□□□ 1
ATN1-204ENST00000541029 IFRD2Q12894 506 aaPredicted RBP21.32■■□□□ 1
ATN1-204ENST00000541029 ORC1Q13415 861 aa21.32■■□□□ 1
ATN1-204ENST00000541029 RUNX3Q13761 415 aa21.32■■□□□ 1
ATN1-204ENST00000541029 SGSM1Q2NKQ1 1148 aa21.32■■□□□ 1
ATN1-204ENST00000541029 CC2D1AQ6P1N0 951 aaPredicted RBP21.32■■□□□ 1
ATN1-204ENST00000541029 INTS8Q75QN2 995 aaKnown RBP21.32■■□□□ 1
ATN1-204ENST00000541029 FAM35AQ86V20 835 aa21.32■■□□□ 1
ATN1-204ENST00000541029 FAM186BQ8IYM0 893 aa21.32■■□□□ 1
ATN1-204ENST00000541029 CHFRQ96EP1 664 aa21.32■■□□□ 1
ATN1-204ENST00000541029 CCDC34Q96HJ3 373 aa21.32■■□□□ 1
ATN1-204ENST00000541029 PCDHGA2Q9Y5H1 932 aa21.32■■□□□ 1
ATN1-204ENST00000541029 DMXL1Q9Y485 3027 aa21.32■■□□□ 1
ATN1-204ENST00000541029 ASS1P00966 412 aaKnown RBP21.31■■□□□ 1
ATN1-204ENST00000541029 TDGF1P13385 188 aa21.31■■□□□ 1
ATN1-204ENST00000541029 P4HA1P13674 534 aa21.31■■□□□ 1
ATN1-204ENST00000541029 GCLMP48507 274 aa21.31■■□□□ 1
ATN1-204ENST00000541029 SATB1Q01826 763 aa21.31■■□□□ 1
ATN1-204ENST00000541029 PPP3CAQ08209 521 aa21.31■■□□□ 1
ATN1-204ENST00000541029 TAF4BQ92750 862 aa21.31■■□□□ 1
ATN1-204ENST00000541029 NELL1Q92832 810 aa21.31■■□□□ 1
ATN1-204ENST00000541029 MED10Q9BTT4 135 aa21.31■■□□□ 1
ATN1-204ENST00000541029 MMRN2Q9H8L6 949 aa21.31■■□□□ 1
ATN1-204ENST00000541029 ZSCAN32Q9NX65 697 aa21.31■■□□□ 1
ATN1-204ENST00000541029 EHD2Q9NZN4 543 aa21.31■■□□□ 1
ATN1-204ENST00000541029 TRPM5Q9NZQ8 1165 aa21.31■■□□□ 1
ATN1-204ENST00000541029 MYOFQ9NZM1 2061 aa21.31■■□□□ 1
ATN1-204ENST00000541029 ATP8B3O60423 1300 aa21.3■■□□□ 1
ATN1-204ENST00000541029 GOLGA6L4A6NEF3 574 aa21.3■■□□□ 1
ATN1-204ENST00000541029 KRT13P13646 458 aa21.3■■□□□ 1
ATN1-204ENST00000541029 HDCP19113 662 aa21.3■■□□□ 1
ATN1-204ENST00000541029 RPL13P26373 211 aaKnown RBP21.3■■□□□ 1
ATN1-204ENST00000541029 PSMC2P35998 433 aaKnown RBP21.3■■□□□ 1
ATN1-204ENST00000541029 CCR3P51677 355 aa21.3■■□□□ 1
ATN1-204ENST00000541029 CCINQ13939 588 aa21.3■■□□□ 1
ATN1-204ENST00000541029 PDGFRLQ15198 375 aa21.3■■□□□ 1
ATN1-204ENST00000541029 DGKKQ5KSL6 1271 aa21.3■■□□□ 1
ATN1-204ENST00000541029 ACOT1Q86TX2 421 aa21.3■■□□□ 1
ATN1-204ENST00000541029 ZBTB44Q8NCP5 570 aa21.3■■□□□ 1
ATN1-204ENST00000541029 TAS1R2Q8TE23 839 aa21.3■■□□□ 1
ATN1-204ENST00000541029 SH3RF2Q8TEC5 729 aa21.3■■□□□ 1
ATN1-204ENST00000541029 TNIP3Q96KP6 325 aa21.3■■□□□ 1
ATN1-204ENST00000541029 KRT82Q9NSB4 513 aa21.3■■□□□ 1
ATN1-204ENST00000541029 ARHGAP26Q9UNA1 814 aa21.3■■□□□ 1
ATN1-204ENST00000541029 WNT6Q9Y6F9 365 aa21.3■■□□□ 1
ATN1-204ENST00000541029 ZNF840PA6NDX5 716 aa21.29■■□□□ 1
ATN1-204ENST00000541029 CCDC130P13994 396 aa21.29■■□□□ 1
ATN1-204ENST00000541029 NDST1P52848 882 aa21.29■■□□□ 1
ATN1-204ENST00000541029 TAF10Q12962 218 aa21.29■■□□□ 1
ATN1-204ENST00000541029 ADAM9Q13443 819 aa21.29■■□□□ 1
ATN1-204ENST00000541029 PAQR9Q6ZVX9 377 aa21.29■■□□□ 1
ATN1-204ENST00000541029 FUKQ8N0W3 1084 aa21.29■■□□□ 1
ATN1-204ENST00000541029 ENGASEQ8NFI3 743 aa21.29■■□□□ 1
ATN1-204ENST00000541029 OSCP1Q8WVF1 389 aa21.29■■□□□ 1
ATN1-204ENST00000541029 ATRIPQ8WXE1 791 aa21.29■■□□□ 1
ATN1-204ENST00000541029 ERCC4Q92889 916 aaPredicted RBP21.29■■□□□ 1
ATN1-204ENST00000541029 EEF2KMTQ96G04 330 aa21.29■■□□□ 1
ATN1-204ENST00000541029 SMARCD1Q96GM5 515 aa21.29■■□□□ 1
ATN1-204ENST00000541029 KCNK16Q96T55 309 aa21.29■■□□□ 1
ATN1-204ENST00000541029 APOBEC3GQ9HC16 384 aaKnown RBP21.29■■□□□ 1
ATN1-204ENST00000541029 DUS2Q9NX74 493 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms