RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 GAB4Q2WGN9 574 aa28.67■■■□□ 2.18
CHFR-218ENST00000540963 SPDYCQ5MJ68 293 aa28.67■■■□□ 2.18
CHFR-218ENST00000540963 TTLL2Q9BWV7 592 aa28.67■■■□□ 2.18
CHFR-218ENST00000540963 TRPM5Q9NZQ8 1165 aa28.67■■■□□ 2.18
CHFR-218ENST00000540963 SIX4Q9UIU6 781 aa28.67■■■□□ 2.18
CHFR-218ENST00000540963 R3HCC1Q9Y3T6 440 aaKnown RBP28.67■■■□□ 2.18
CHFR-218ENST00000540963 ASCC3Q8N3C0 2202 aaKnown RBP28.67■■■□□ 2.18
CHFR-218ENST00000540963 PI4KAP42356 2102 aa28.66■■■□□ 2.18
CHFR-218ENST00000540963 MYMKA6NI61 221 aa28.66■■■□□ 2.18
CHFR-218ENST00000540963 LEFTY2O00292 366 aa28.66■■■□□ 2.18
CHFR-218ENST00000540963 SLC9A3R1O14745 358 aaPredicted RBP28.66■■■□□ 2.18
CHFR-218ENST00000540963 KIAA0391O15091 583 aaKnown RBP28.66■■■□□ 2.18
CHFR-218ENST00000540963 TMEM191BP0C7N4 346 aa28.66■■■□□ 2.18
CHFR-218ENST00000540963 BCKDHBP21953 392 aa28.66■■■□□ 2.18
CHFR-218ENST00000540963 IRX4P78413 519 aa28.66■■■□□ 2.18
CHFR-218ENST00000540963 LMBRD2Q68DH5 695 aaPredicted RBP28.66■■■□□ 2.18
CHFR-218ENST00000540963 DENND5BQ6ZUT9 1274 aa28.66■■■□□ 2.18
CHFR-218ENST00000540963 DNAJC19Q96DA6 116 aa28.66■■■□□ 2.18
CHFR-218ENST00000540963 SYT15Q9BQS2 421 aa28.66■■■□□ 2.18
CHFR-218ENST00000540963 PCNX2A6NKB5 2137 aa28.65■■■□□ 2.18
CHFR-218ENST00000540963 TNFRSF10BO14763 440 aa28.65■■■□□ 2.18
CHFR-218ENST00000540963 GCNT3O95395 438 aa28.65■■■□□ 2.18
CHFR-218ENST00000540963 P2RY2P41231 377 aa28.65■■■□□ 2.18
CHFR-218ENST00000540963 DHPSP49366 369 aaPredicted RBP28.65■■■□□ 2.18
CHFR-218ENST00000540963 SEC13P55735 322 aa28.65■■■□□ 2.18
CHFR-218ENST00000540963 ZXDBP98169 803 aa28.65■■■□□ 2.18
CHFR-218ENST00000540963 CCDC142Q17RM4 750 aa28.65■■■□□ 2.18
CHFR-218ENST00000540963 LPCAT2Q7L5N7 544 aa28.65■■■□□ 2.18
CHFR-218ENST00000540963 ADGRG2Q8IZP9 1017 aa28.65■■■□□ 2.18
CHFR-218ENST00000540963 SYCP3Q8IZU3 236 aa28.65■■■□□ 2.18
CHFR-218ENST00000540963 ZSWIM2Q8NEG5 633 aa28.65■■■□□ 2.18
CHFR-218ENST00000540963 EPSTI1Q96J88 318 aa28.65■■■□□ 2.18
CHFR-218ENST00000540963 SPACA7Q96KW9 195 aa28.65■■■□□ 2.18
CHFR-218ENST00000540963 MTMR12Q9C0I1 747 aa28.65■■■□□ 2.18
CHFR-218ENST00000540963 A0A0A0MRY4 1105 aa28.64■■■□□ 2.18
CHFR-218ENST00000540963 PATE3B3GLJ2 98 aa28.64■■■□□ 2.18
CHFR-218ENST00000540963 OLFM2O95897 454 aa28.64■■■□□ 2.18
CHFR-218ENST00000540963 NOP14P78316 857 aaKnown RBP28.64■■■□□ 2.18
CHFR-218ENST00000540963 LARP1BQ659C4 914 aaKnown RBP28.64■■■□□ 2.18
CHFR-218ENST00000540963 SV2BQ7L1I2 683 aa28.64■■■□□ 2.18
CHFR-218ENST00000540963 WHAMMQ8TF30 809 aa28.64■■■□□ 2.18
CHFR-218ENST00000540963 KBTBD7Q8WVZ9 684 aa28.64■■■□□ 2.18
CHFR-218ENST00000540963 MYLPFQ96A32 169 aa28.64■■■□□ 2.18
CHFR-218ENST00000540963 ANKRD36BP1Q96IX9 119 aa28.64■■■□□ 2.18
CHFR-218ENST00000540963 NUSAP1Q9BXS6 441 aaKnown RBP28.64■■■□□ 2.18
CHFR-218ENST00000540963 PDE11AQ9HCR9 933 aa28.64■■■□□ 2.18
CHFR-218ENST00000540963 POLMQ9NP87 494 aaPredicted RBP28.64■■■□□ 2.18
CHFR-218ENST00000540963 SMC3Q9UQE7 1217 aa28.64■■■□□ 2.18
CHFR-218ENST00000540963 TRIM66O15016 1216 aa28.63■■■□□ 2.17
CHFR-218ENST00000540963 HCRTO43612 131 aa28.63■■■□□ 2.17
CHFR-218ENST00000540963 ATP2C2O75185 946 aa28.63■■■□□ 2.17
CHFR-218ENST00000540963 CYP17A1P05093 508 aa28.63■■■□□ 2.17
CHFR-218ENST00000540963 ANXA13P27216 316 aa28.63■■■□□ 2.17
CHFR-218ENST00000540963 GRIK1P39086 918 aa28.63■■■□□ 2.17
CHFR-218ENST00000540963 BYSLQ13895 437 aaKnown RBP28.63■■■□□ 2.17
CHFR-218ENST00000540963 SURF1Q15526 300 aa28.63■■■□□ 2.17
CHFR-218ENST00000540963 SCARA3Q6AZY7 606 aa28.63■■■□□ 2.17
CHFR-218ENST00000540963 TMEM92Q6UXU6 159 aa28.63■■■□□ 2.17
CHFR-218ENST00000540963 CCDC33Q8N5R6 958 aa28.63■■■□□ 2.17
CHFR-218ENST00000540963 PIGKQ92643 395 aa28.63■■■□□ 2.17
CHFR-218ENST00000540963 GATA6Q92908 595 aa28.63■■■□□ 2.17
CHFR-218ENST00000540963 PNKPQ96T60 521 aa28.63■■■□□ 2.17
CHFR-218ENST00000540963 INTS13Q9NVM9 706 aa28.63■■■□□ 2.17
CHFR-218ENST00000540963 IGF2RP11717 2491 aa28.62■■■□□ 2.17
CHFR-218ENST00000540963 ZNF840PA6NDX5 716 aa28.62■■■□□ 2.17
CHFR-218ENST00000540963 BDNFP23560 247 aa28.62■■■□□ 2.17
CHFR-218ENST00000540963 DHCR24Q15392 516 aa28.62■■■□□ 2.17
CHFR-218ENST00000540963 EOGTQ5NDL2 527 aa28.62■■■□□ 2.17
CHFR-218ENST00000540963 USP49Q70CQ1 688 aa28.62■■■□□ 2.17
CHFR-218ENST00000540963 FILIP1Q7Z7B0 1213 aa28.62■■■□□ 2.17
CHFR-218ENST00000540963 SYT12Q8IV01 421 aa28.62■■■□□ 2.17
CHFR-218ENST00000540963 GPD1LQ8N335 351 aa28.62■■■□□ 2.17
CHFR-218ENST00000540963 HPDLQ96IR7 371 aa28.62■■■□□ 2.17
CHFR-218ENST00000540963 CBWD1Q9BRT8 395 aa28.62■■■□□ 2.17
CHFR-218ENST00000540963 SLC32A1Q9H598 525 aa28.62■■■□□ 2.17
CHFR-218ENST00000540963 CRTAC1Q9NQ79 661 aa28.62■■■□□ 2.17
CHFR-218ENST00000540963 TBC1D7Q9P0N9 293 aa28.62■■■□□ 2.17
CHFR-218ENST00000540963 RALYQ9UKM9 306 aaKnown RBP28.62■■■□□ 2.17
CHFR-218ENST00000540963 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.62■■■□□ 2.17
CHFR-218ENST00000540963 ASPMQ8IZT6 3477 aa28.62■■■□□ 2.17
CHFR-218ENST00000540963 SPEGQ15772 3267 aa28.61■■■□□ 2.17
CHFR-218ENST00000540963 FRMD3A2A2Y4 597 aa28.61■■■□□ 2.17
CHFR-218ENST00000540963 TULP1O00294 542 aaPredicted RBP28.61■■■□□ 2.17
CHFR-218ENST00000540963 APODP05090 189 aa28.61■■■□□ 2.17
CHFR-218ENST00000540963 CHRM1P11229 460 aaPredicted RBP28.61■■■□□ 2.17
CHFR-218ENST00000540963 WARSP23381 471 aaKnown RBP28.61■■■□□ 2.17
CHFR-218ENST00000540963 LMO2P25791 158 aa28.61■■■□□ 2.17
CHFR-218ENST00000540963 HOXD12P35452 270 aa28.61■■■□□ 2.17
CHFR-218ENST00000540963 TRIM61Q5EBN2 209 aa28.61■■■□□ 2.17
CHFR-218ENST00000540963 RRAGBQ5VZM2 374 aa28.61■■■□□ 2.17
CHFR-218ENST00000540963 DDX42Q86XP3 938 aaKnown RBP eCLIP28.61■■■□□ 2.17
CHFR-218ENST00000540963 IL17RCQ8NAC3 791 aa28.61■■■□□ 2.17
CHFR-218ENST00000540963 MYCBPAPQ8TBZ2 947 aa28.61■■■□□ 2.17
CHFR-218ENST00000540963 C8orf48Q96LL4 319 aa28.61■■■□□ 2.17
CHFR-218ENST00000540963 SCNM1Q9BWG6 230 aa28.61■■■□□ 2.17
CHFR-218ENST00000540963 MYO18AQ92614 2054 aaKnown RBP28.6■■■□□ 2.17
CHFR-218ENST00000540963 MYOFQ9NZM1 2061 aa28.6■■■□□ 2.17
CHFR-218ENST00000540963 GOLGA8IPA6NC78 632 aa28.6■■■□□ 2.17
CHFR-218ENST00000540963 GOLGA8JA6NMD2 632 aa28.6■■■□□ 2.17
CHFR-218ENST00000540963 UPK3BL1B0FP48 263 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms