RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 LZTFL1Q9NQ48 299 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 DDX43Q9NXZ2 648 aaKnown RBP7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 L1RE1Q9UN81 338 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 CNTN6Q9UQ52 1028 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 MICAL3Q7RTP6 2002 aa7.05□□□□□ -1.28
CLTCL1-206ENST00000540896 USP27XA6NNY8 438 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 NT5C1B-RDH14C9J2C7 533 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 F8W810 466 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 DDX3XO00571 662 aaKnown RBP eCLIP7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 KRT86O43790 486 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 B4GALT3O60512 393 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 RTN2O75298 545 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 LCA5LO95447 670 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 FTLP02792 175 aaPredicted RBP7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 ITGB1P05556 798 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 GALTP07902 379 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 VDRP11473 427 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 PTPN1P18031 435 aaKnown RBP7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 ACAT1P24752 427 aaKnown RBP7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 PCSK1P29120 753 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 PBX3P40426 434 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 NSFP46459 744 aaKnown RBP7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 SLC11A1P49279 550 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 VAV2P52735 878 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 RABGGTBP53611 331 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 BCAR1P56945 870 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 SLC8A3P57103 927 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 YWHAHQ04917 246 aaPredicted RBP7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 INCA1Q0VD86 236 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 ELAVL2Q12926 359 aaKnown RBP7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 STILQ15468 1287 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 CLEC16AQ2KHT3 1053 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 ASTE1Q2TB18 679 aaPredicted RBP7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 FAM171A1Q5VUB5 890 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 OVOS1Q6IE37 1185 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 KIAA1841Q6NSI8 718 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 TMEM214Q6NUQ4 689 aaKnown RBP7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 TRIM72Q6ZMU5 477 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 PASD1Q8IV76 773 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 CMTR2Q8IYT2 770 aaKnown RBP7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 FIBCD1Q8N539 461 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 C12orf29Q8N999 325 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 SLC30A5Q8TAD4 765 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 LNX1Q8TBB1 728 aaPredicted RBP7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 ZNF606Q8WXB4 792 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 CPA5Q8WXQ8 436 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 ACDQ96AP0 544 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 CYFIP2Q96F07 1278 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 SUSD3Q96L08 255 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 ZNF558Q96NG5 402 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 TWNKQ96RR1 684 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 PCDHB18PQ96TA0 734 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 RAD9AQ99638 391 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 MED10Q9BTT4 135 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 SYNCQ9H7C4 482 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 HESX1Q9UBX0 185 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 HMGXB4Q9UGU5 601 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 NAGPAQ9UK23 515 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 NOCTQ9UK39 431 aaKnown RBP7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 ADAM28Q9UKQ2 775 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 GUCA1BQ9UMX6 200 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 STXBP5LQ9Y2K9 1186 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 INSL6Q9Y581 213 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 TTC3P53804 2025 aa7.04□□□□□ -1.28
CLTCL1-206ENST00000540896 TMEM189-UBE2V1I3L0A0 370 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 M0QYV0 167 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 M0QZQ0 153 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 GABRDO14764 452 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 ZNF263O14978 683 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 SYN3O14994 580 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 OIP5O43482 229 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 HCRTO43612 131 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 KIF5CO60282 957 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 LSM8O95777 96 aaKnown RBP7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 GZMAP12544 262 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 MYOGP15173 224 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 LAG3P18627 525 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 TYMPP19971 482 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 ABCB4P21439 1286 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 ADORA2BP29275 332 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 NOP2P46087 812 aaKnown RBP7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 AARSP49588 968 aaKnown RBP eCLIP7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 GALCP54803 685 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 PSMC1P62191 440 aaKnown RBP7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 HTRA4P83105 476 aaPredicted RBP7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 TSPY1Q01534 308 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 FMO1Q01740 532 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 PTPN14Q15678 1187 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 CNGA2Q16280 664 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 GOLGA7BQ2TAP0 167 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 EFHC2Q5JST6 749 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 DNTTIP2Q5QJE6 756 aaKnown RBP7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 NAA35Q5VZE5 725 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 ACAD10Q6JQN1 1059 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 PPP1R2P3Q6NXS1 205 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 DENND1BQ6P3S1 775 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 KCNT2Q6UVM3 1135 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 CD300LGQ6UXG3 332 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 LIMS2Q7Z4I7 341 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 ALYREFQ86V81 257 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms