RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 CDY1Q9Y6F8 540 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 SPTA1P02549 2419 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 ASXL3Q9C0F0 2248 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 MYO18BQ8IUG5 2567 aa5.08□□□□□ -1.6
SNHG1-214ENST00000540865 CACNA1EQ15878 2313 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 CYP3A7-CYP3A51PA0A087WV96 503 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 A0A1B0GUA9 196 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 UPK3BL1B0FP48 263 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 UPK3BL2E5RIL1 263 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 INO80B-WBP1J3KQ70 363 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 PRRG1O14668 218 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 ADAMTS3O15072 1205 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 ZBTB43O43298 467 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 TRAPPC3O43617 180 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 EDIL3O43854 480 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 MOSPD3O75425 235 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 NPTXRO95502 500 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 THP07101 528 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 GSTP1P09211 210 aaKnown RBP5.07□□□□□ -1.6
SNHG1-214ENST00000540865 ATF2P15336 505 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 GLB1P16278 677 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 ARF4P18085 180 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-214ENST00000540865 LIG1P18858 919 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 NME2P22392 152 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 CYP3A7P24462 503 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 CHMLP26374 656 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 RDXP35241 583 aaKnown RBP5.07□□□□□ -1.6
SNHG1-214ENST00000540865 QARSP47897 775 aaKnown RBP5.07□□□□□ -1.6
SNHG1-214ENST00000540865 PXNP49023 591 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-214ENST00000540865 EPHA5P54756 1037 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 ROR1Q01973 937 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 CREB5Q02930 508 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 MBTD1Q05BQ5 628 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 TFDP1Q14186 410 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 PON2Q15165 354 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 PTPAQ15257 358 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 NAB2Q15742 525 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 COL28A1Q2UY09 1125 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 Q4G0T1 1027 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 ARHGAP29Q52LW3 1261 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 TPGS2Q68CL5 300 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 IQCEQ6IPM2 695 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 KIAA1211LQ6NV74 962 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 C19orf48Q6RUI8 117 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 HAUS6Q7Z4H7 955 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 C11orf74Q86VG3 221 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 ELMOD1Q8N336 334 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 TMEM130Q8N3G9 435 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 DEFB124Q8NES8 71 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 KCNB2Q92953 911 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 GJA10Q969M2 543 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 CPB2Q96IY4 423 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 MEGF10Q96KG7 1140 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 ZNF512Q96ME7 567 aaPredicted RBP5.07□□□□□ -1.6
SNHG1-214ENST00000540865 NFKBIZQ9BYH8 718 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 CYP4F11Q9HBI6 524 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 CACNG4Q9UBN1 327 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 KLK13Q9UKR3 277 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 MAFFQ9ULX9 164 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 RBM8AQ9Y5S9 174 aaKnown RBP5.07□□□□□ -1.6
SNHG1-214ENST00000540865 APC2O95996 2303 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 MYH15Q9Y2K3 1946 aa5.07□□□□□ -1.6
SNHG1-214ENST00000540865 ZNF462Q96JM2 2506 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 ACACAQ13085 2346 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 NCANO14594 1321 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 PTGESO14684 152 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 SGSM2O43147 1006 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 B3GAT3O94766 335 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 SEC24AO95486 1093 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 RECKO95980 971 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 DRD2P14416 443 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 ARNTP27540 789 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 TKTP29401 623 aaKnown RBP5.06□□□□□ -1.6
SNHG1-214ENST00000540865 RCAN1P53805 252 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 GRSF1Q12849 480 aaKnown RBP eCLIP5.06□□□□□ -1.6
SNHG1-214ENST00000540865 LMAN2Q12907 356 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 EMC2Q15006 297 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 MCTP1Q6DN14 999 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 PKN3Q6P5Z2 889 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 SV2BQ7L1I2 683 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 OTUD6AQ7L8S5 288 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 PIP4P1Q86T03 277 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 C4orf19Q8IY42 314 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 SHKBP1Q8TBC3 707 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 ETNPPLQ8TBG4 499 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 RSPRY1Q96DX4 576 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 UROC1Q96N76 676 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 BBC3Q96PG8 261 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-214ENST00000540865 UBL7Q96S82 380 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-214ENST00000540865 TMEM209Q96SK2 561 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 TMPRSS13Q9BYE2 586 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 LRRC2Q9BYS8 371 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 C22orf23Q9BZE7 217 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 RWDD1Q9H446 243 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-214ENST00000540865 SLITRK6Q9H5Y7 841 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 ASAH2Q9NR71 780 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 OBP2AQ9NY56 170 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 EBF1Q9UH73 591 aa5.06□□□□□ -1.6
SNHG1-214ENST00000540865 EVLQ9UI08 416 aaPredicted RBP5.06□□□□□ -1.6
SNHG1-214ENST00000540865 TPCN1Q9ULQ1 816 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms