RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 CD300CQ08708 224 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 BTG3Q14201 252 aaPredicted RBP5.46□□□□□ -1.53
PROM1-220ENST00000540805 PKN2Q16513 984 aaKnown RBP5.46□□□□□ -1.53
PROM1-220ENST00000540805 CCL15Q16663 113 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 DAB2IPQ5VWQ8 1189 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 PPP1R2P3Q6NXS1 205 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 OLFML1Q6UWY5 402 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 RINLQ6ZS11 566 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 RELL1Q8IUW5 271 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 SLC15A3Q8IY34 581 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 ARHGAP24Q8N264 748 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 CCDC89Q8N998 374 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 RIN3Q8TB24 985 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 ACER1Q8TDN7 264 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 NSUN6Q8TEA1 469 aaKnown RBP5.46□□□□□ -1.53
PROM1-220ENST00000540805 DCAF4Q8WV16 495 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 HSPBAP1Q96EW2 488 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 TTC25Q96NG3 672 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 NR1H4Q96RI1 486 aaPredicted RBP5.46□□□□□ -1.53
PROM1-220ENST00000540805 RBM15Q96T37 977 aaKnown RBP eCLIP5.46□□□□□ -1.53
PROM1-220ENST00000540805 PCDHB18PQ96TA0 734 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 ZNF184Q99676 751 aaPredicted RBP5.46□□□□□ -1.53
PROM1-220ENST00000540805 CORO1BQ9BR76 489 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 FOXP3Q9BZS1 431 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 VPS33BQ9H267 617 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 KIAA1586Q9HCI6 787 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 SAYSD1Q9NPB0 183 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 AGPAT3Q9NRZ7 376 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 GRID1Q9ULK0 1009 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 SYNPO2Q9UMS6 1093 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 DOLKQ9UPQ8 538 aa5.46□□□□□ -1.53
PROM1-220ENST00000540805 EMSYQ7Z589 1322 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 IGLV3-22A0A075B6J6 115 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 CFAP69A5D8W1 941 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 TRIM43BA6NCK2 446 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 GSC2O15499 205 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 FOXD2O60548 495 aaPredicted RBP5.46□□□□□ -1.54
PROM1-220ENST00000540805 TBX10O75333 385 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 TFPTP0C1Z6 253 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 RPA3P35244 121 aaPredicted RBP5.46□□□□□ -1.54
PROM1-220ENST00000540805 GRIA2P42262 883 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 NSFP46459 744 aaKnown RBP5.46□□□□□ -1.54
PROM1-220ENST00000540805 ZNF280AP59817 542 aaPredicted RBP5.46□□□□□ -1.54
PROM1-220ENST00000540805 ARHGAP4P98171 946 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 CENPCQ03188 943 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 AP3B2Q13367 1082 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 SLC1A5Q15758 541 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 RINT1Q6NUQ1 792 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 CCDC62Q6P9F0 684 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 LVRNQ6Q4G3 990 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 TDRPQ86YL5 185 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 APOBEC3FQ8IUX4 373 aaKnown RBP5.46□□□□□ -1.54
PROM1-220ENST00000540805 SCYL3Q8IZE3 742 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 PDCD7Q8N8D1 485 aaKnown RBP5.46□□□□□ -1.54
PROM1-220ENST00000540805 EPS8L1Q8TE68 723 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 ZNF75CPQ92670 426 aaPredicted RBP5.46□□□□□ -1.54
PROM1-220ENST00000540805 PRR11Q96HE9 360 aaPredicted RBP5.46□□□□□ -1.54
PROM1-220ENST00000540805 NSL1Q96IY1 281 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 NT5C1BQ96P26 610 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 PARVGQ9HBI0 331 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 CYLDQ9NQC7 956 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 GABBR1Q9UBS5 961 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 MOSPD1Q9UJG1 213 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 DCTN4Q9UJW0 460 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 UMODL1Q5DID0 1318 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 FAM86B1E9PN63 330 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 WNT10BO00744 389 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 XPOTO43592 962 aaKnown RBP5.46□□□□□ -1.54
PROM1-220ENST00000540805 USP1O94782 785 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 PSAPP07602 524 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 FAM86B2P0C5J1 330 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 COL6A2P12110 1019 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 PLS3P13797 630 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 PSMD7P51665 324 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 SH3BGRP55822 239 aaPredicted RBP5.46□□□□□ -1.54
PROM1-220ENST00000540805 CXCL9Q07325 125 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 CDO1Q16878 200 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 CTC1Q2NKJ3 1217 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 GNASQ5JWF2 1037 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 C6orf183Q5T699 404 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 B3GNT9Q6UX72 402 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 TSHZ1Q6ZSZ6 1077 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 LDHDQ86WU2 507 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 EXOC8Q8IYI6 725 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 MCUQ8NE86 351 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 LMO3Q8TAP4 145 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 AZIN2Q96A70 460 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 SPATA33Q96N06 139 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 CENPKQ9BS16 269 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 POLR3CQ9BUI4 534 aaPredicted RBP5.46□□□□□ -1.54
PROM1-220ENST00000540805 CCDC28BQ9BUN5 200 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 CALN1Q9BXU9 219 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 VPS37BQ9H9H4 285 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 NGRNQ9NPE2 291 aaKnown RBP5.46□□□□□ -1.54
PROM1-220ENST00000540805 ARL8BQ9NVJ2 186 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 DMAC2Q9NW81 257 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 SPATA7Q9P0W8 599 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 ATXN10Q9UBB4 475 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 TUBGCP4Q9UGJ1 667 aa5.46□□□□□ -1.54
PROM1-220ENST00000540805 PCDHGB4Q9UN71 923 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms