RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 CKBP12277 381 aa14.67□□□□□ -0.06
USP3-204ENST00000540797 PRKAR2AP13861 404 aaKnown RBP14.67□□□□□ -0.06
USP3-204ENST00000540797 MAGEA4P43358 317 aa14.67□□□□□ -0.06
USP3-204ENST00000540797 FIGNQ5HY92 759 aa14.67□□□□□ -0.06
USP3-204ENST00000540797 RXFP2Q8WXD0 754 aa14.67□□□□□ -0.06
USP3-204ENST00000540797 PGLYRP2Q96PD5 576 aa14.67□□□□□ -0.06
USP3-204ENST00000540797 PDGFDQ9GZP0 370 aaPredicted RBP14.67□□□□□ -0.06
USP3-204ENST00000540797 CD274Q9NZQ7 290 aa14.67□□□□□ -0.06
USP3-204ENST00000540797 ZNF541Q9H0D2 1346 aa14.67□□□□□ -0.06
USP3-204ENST00000540797 ARHGAP10A1A4S6 786 aa14.67□□□□□ -0.06
USP3-204ENST00000540797 MEIS2O14770 477 aa14.67□□□□□ -0.06
USP3-204ENST00000540797 HSPA9P38646 679 aaKnown RBP14.67□□□□□ -0.06
USP3-204ENST00000540797 TREML2Q5T2D2 321 aa14.67□□□□□ -0.06
USP3-204ENST00000540797 HIBCHQ6NVY1 386 aaPredicted RBP14.67□□□□□ -0.06
USP3-204ENST00000540797 BLOC1S5Q8TDH9 187 aa14.67□□□□□ -0.06
USP3-204ENST00000540797 CCDC138Q96M89 665 aa14.67□□□□□ -0.06
USP3-204ENST00000540797 CELF4Q9BZC1 486 aaKnown RBP14.67□□□□□ -0.06
USP3-204ENST00000540797 TSPAN16Q9UKR8 245 aa14.67□□□□□ -0.06
USP3-204ENST00000540797 ANGPTL2Q9UKU9 493 aa14.67□□□□□ -0.06
USP3-204ENST00000540797 GMNCA6NCL1 334 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 LONRF1Q17RB8 773 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 MAP4K3Q8IVH8 894 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 SLC20A1Q8WUM9 679 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 KDM4CQ9H3R0 1056 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 MROH7Q68CQ1 1323 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 E2F6O75461 281 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 MAP3K6O95382 1288 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 ARHGDIAP52565 204 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 SLC12A3P55017 1021 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 TRADDQ15628 312 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 ABRAQ8N0Z2 381 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 EMC1Q8N766 993 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 MTMR9Q96QG7 549 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 GAD1Q99259 594 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 SMYD3Q9H7B4 428 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 MRPL40Q9NQ50 206 aaKnown RBP14.66□□□□□ -0.06
USP3-204ENST00000540797 CDY2AQ9Y6F7 541 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 C2orf81A6NN90 581 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 TADA3O75528 432 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 PSMD10O75832 226 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 PTK7Q13308 1070 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 CLEC16AQ2KHT3 1053 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 TATDN1Q6P1N9 297 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 ERP44Q9BS26 406 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 YIPF2Q9BWQ6 316 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 CIPCQ9C0C6 399 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 XAB2Q9HCS7 855 aaKnown RBP14.66□□□□□ -0.06
USP3-204ENST00000540797 SMG5Q9UPR3 1016 aaKnown RBP14.66□□□□□ -0.06
USP3-204ENST00000540797 LZTS3O60299 673 aaPredicted RBP14.66□□□□□ -0.06
USP3-204ENST00000540797 ENDOD1O94919 500 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 NAA30Q147X3 362 aaPredicted RBP14.66□□□□□ -0.06
USP3-204ENST00000540797 FAXCQ5TGI0 409 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 LCA5Q86VQ0 697 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 UNC45BQ8IWX7 931 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 PPP1R13LQ8WUF5 828 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 STAMBPL1Q96FJ0 436 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 SMARCD1Q96GM5 515 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 FRMD8P1Q9BZ68 369 aaPredicted RBP14.66□□□□□ -0.06
USP3-204ENST00000540797 BLOC1S4Q9NUP1 217 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 PCMTD2Q9NV79 361 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 USP18Q9UMW8 372 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 UMODL1Q5DID0 1318 aa14.66□□□□□ -0.06
USP3-204ENST00000540797 SUPT3HB4E1H0 165 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 SUPT3HO75486 399 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 RECQL4O94761 1208 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 RHOBTB1O94844 696 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 AGTP01019 485 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 WEE1P30291 646 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 VCPP55072 806 aaKnown RBP14.65□□□□□ -0.06
USP3-204ENST00000540797 FBXW4P57775 412 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 AMPD2Q01433 879 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 SPDYAQ5MJ70 313 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 DENND5BQ6ZUT9 1274 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 LZICQ8WZA0 190 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 LRRC37BQ96QE4 947 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 FRMD8Q9BZ67 464 aaPredicted RBP14.65□□□□□ -0.06
USP3-204ENST00000540797 SCUBE2Q9NQ36 999 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 TFDP3Q5H9I0 405 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 ARMC6Q6NXE6 501 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 EDEM1Q92611 657 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 AAR2Q9Y312 384 aaKnown RBP14.65□□□□□ -0.06
USP3-204ENST00000540797 MRC1P22897 1456 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 PMS1P54277 932 aaKnown RBP14.65□□□□□ -0.06
USP3-204ENST00000540797 TMCO4Q5TGY1 634 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 PPCSQ9HAB8 311 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 KCNMB3Q9NPA1 279 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 ADA2Q9NZK5 511 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 MRPS6P82932 125 aaKnown RBP14.65□□□□□ -0.06
USP3-204ENST00000540797 SNX31Q8N9S9 440 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 APOL5Q9BWW9 433 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 UBXN6Q9BZV1 441 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 TMEM134Q9H6X4 195 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 ATP5HO75947 161 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 CTCFP49711 727 aaPredicted RBP14.65□□□□□ -0.06
USP3-204ENST00000540797 NUMBP49757 651 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 KYNUQ16719 465 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 LRRC43Q8N309 656 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 TMEM199Q8N511 208 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 CCDC33Q8N5R6 958 aa14.65□□□□□ -0.06
USP3-204ENST00000540797 ATXN3LQ9H3M9 355 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms