RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 OBSL1O75147 1896 aa18.24■□□□□ 0.51
CACNA2D4-211ENST00000540728 FAM186AA6NE01 2351 aa18.24■□□□□ 0.51
CACNA2D4-211ENST00000540728 CKMP06732 381 aa18.24■□□□□ 0.51
CACNA2D4-211ENST00000540728 CCNE1P24864 410 aa18.24■□□□□ 0.51
CACNA2D4-211ENST00000540728 RPS9P46781 194 aaKnown RBP18.24■□□□□ 0.51
CACNA2D4-211ENST00000540728 PPP3CCP48454 512 aa18.24■□□□□ 0.51
CACNA2D4-211ENST00000540728 NOP14P78316 857 aaKnown RBP18.24■□□□□ 0.51
CACNA2D4-211ENST00000540728 FKBP3Q00688 224 aaKnown RBP18.24■□□□□ 0.51
CACNA2D4-211ENST00000540728 PPP3CAQ08209 521 aa18.24■□□□□ 0.51
CACNA2D4-211ENST00000540728 ZNF268Q14587 947 aaPredicted RBP18.24■□□□□ 0.51
CACNA2D4-211ENST00000540728 KRT39Q6A163 491 aa18.24■□□□□ 0.51
CACNA2D4-211ENST00000540728 UNC93AQ86WB7 457 aa18.24■□□□□ 0.51
CACNA2D4-211ENST00000540728 ERCC4Q92889 916 aaPredicted RBP18.24■□□□□ 0.51
CACNA2D4-211ENST00000540728 ELMO3Q96BJ8 720 aa18.24■□□□□ 0.51
CACNA2D4-211ENST00000540728 GREB1Q4ZG55 1949 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 CLDN5O00501 218 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 PSMA7O14818 248 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 TADA3O75528 432 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 PFKLP17858 780 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 PPP1R2P41236 205 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 NDST1P52848 882 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 CSTF1Q05048 431 aaKnown RBP18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 LRRC63Q05C16 580 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 ITPRIPL2Q3MIP1 535 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 SPOPLQ6IQ16 392 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 ACOT1Q86TX2 421 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 RALGPS2Q86X27 583 aaPredicted RBP18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 ADSSL1Q8N142 457 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 TTC8Q8TAM2 541 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 TAS1R2Q8TE23 839 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 EEF2KMTQ96G04 330 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 SLITRK1Q96PX8 696 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 HINFPQ9BQA5 517 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 TTLL2Q9BWV7 592 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 SDCBP2Q9H190 292 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 CYP3A43Q9HB55 503 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 GKN1Q9NS71 199 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 GTSE1Q9NYZ3 720 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 CCL26Q9Y258 94 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 GVINP1Q7Z2Y8 2422 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 CACNA1IQ9P0X4 2223 aa18.23■□□□□ 0.51
CACNA2D4-211ENST00000540728 SHISA7A6NL88 538 aa18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 SLC16A3O15427 465 aaKnown RBP18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 RTN3O95197 1032 aaPredicted RBP18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 HDCP19113 662 aa18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 ASPAP45381 313 aa18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 SOX9P48436 509 aa18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 MXI1P50539 228 aa18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 USP46P62068 366 aa18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 TCERG1LQ5VWI1 586 aa18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 ANKRD40Q6AI12 368 aa18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 FAM35AQ86V20 835 aa18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 NUP93Q8N1F7 819 aa18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 CRYBG2Q8N1P7 616 aa18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 SMARCD1Q96GM5 515 aa18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 DHTKD1Q96HY7 919 aaPredicted RBP18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 CYP2S1Q96SQ9 504 aa18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 NIF3L1Q9GZT8 377 aa18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 LMAN1LQ9HAT1 526 aa18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 DMAP1Q9NPF5 467 aaPredicted RBP18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 CFAP54Q96N23 3096 aa18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 PTPRZ1P23471 2315 aaPredicted RBP18.22■□□□□ 0.51
CACNA2D4-211ENST00000540728 DMDP11532 3685 aa18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 SPECC1L-ADORA2AF8WAN1 911 aa18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 AP1G2O75843 785 aa18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 ABL1P00519 1130 aa18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 LMNAP02545 664 aaKnown RBP18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 YWHAQP27348 245 aa18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 MCCD1P59942 119 aaPredicted RBP18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 AMPD2Q01433 879 aa18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 IFRD2Q12894 506 aaPredicted RBP18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 LRRC32Q14392 662 aa18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 PDGFRLQ15198 375 aa18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 ISM2Q6H9L7 571 aa18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 MAML2Q8IZL2 1156 aaPredicted RBP18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 ARL14EPQ8N8R7 260 aaPredicted RBP18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 FBXL13Q8NEE6 735 aa18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 TTC16Q8NEE8 873 aa18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 FAM83CQ9BQN1 747 aa18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 IER2Q9BTL4 223 aa18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 CHMP5Q9NZZ3 219 aa18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 FBXO4Q9UKT5 387 aa18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 ANAPC1Q9H1A4 1944 aa18.21■□□□□ 0.51
CACNA2D4-211ENST00000540728 WDR87Q6ZQQ6 2873 aa18.2■□□□□ 0.5
CACNA2D4-211ENST00000540728 C2orf78A6NCI8 922 aa18.2■□□□□ 0.5
CACNA2D4-211ENST00000540728 GADD45BO75293 160 aaPredicted RBP18.2■□□□□ 0.5
CACNA2D4-211ENST00000540728 CTHP32929 405 aa18.2■□□□□ 0.5
CACNA2D4-211ENST00000540728 CACNA2D1P54289 1103 aa18.2■□□□□ 0.5
CACNA2D4-211ENST00000540728 TNK2Q07912 1038 aa18.2■□□□□ 0.5
CACNA2D4-211ENST00000540728 INCA1Q0VD86 236 aa18.2■□□□□ 0.5
CACNA2D4-211ENST00000540728 TAF10Q12962 218 aa18.2■□□□□ 0.5
CACNA2D4-211ENST00000540728 MTAPQ13126 283 aa18.2■□□□□ 0.5
CACNA2D4-211ENST00000540728 FZD5Q13467 585 aa18.2■□□□□ 0.5
CACNA2D4-211ENST00000540728 RUNX3Q13761 415 aa18.2■□□□□ 0.5
CACNA2D4-211ENST00000540728 MTF1Q14872 753 aa18.2■□□□□ 0.5
CACNA2D4-211ENST00000540728 DCAF17Q5H9S7 520 aaPredicted RBP18.2■□□□□ 0.5
CACNA2D4-211ENST00000540728 WDR44Q5JSH3 913 aa18.2■□□□□ 0.5
CACNA2D4-211ENST00000540728 TTC39CQ8N584 583 aa18.2■□□□□ 0.5
CACNA2D4-211ENST00000540728 PDZD8Q8NEN9 1154 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms