RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 CHSY1Q86X52 802 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 RAVER1Q8IY67 606 aaKnown RBP4.52□□□□□ -1.69
MDM2-227ENST00000540709 IZUMO1Q8IYV9 350 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 SPARTQ8N0X7 666 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 ABRAQ8N0Z2 381 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 RP9Q8TA86 221 aaKnown RBP4.52□□□□□ -1.69
MDM2-227ENST00000540709 C5orf34Q96MH7 638 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 MESP1Q9BRJ9 268 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 FSD1LQ9BXM9 530 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 B3GNT5Q9BYG0 378 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 TRIM54Q9BYV2 358 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 CDH19Q9H159 772 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 SNX14Q9Y5W7 946 aa4.52□□□□□ -1.69
MDM2-227ENST00000540709 COL3A1P02461 1466 aaPredicted RBP4.51□□□□□ -1.69
MDM2-227ENST00000540709 A0A087WWL8 130 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 PPP6CO00743 305 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 CES2O00748 559 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 PHGDHO43175 533 aaKnown RBP4.51□□□□□ -1.69
MDM2-227ENST00000540709 RASSF9O75901 435 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 RASAL1O95294 804 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 KCNA3P22001 575 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 FPR3P25089 353 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 CERS1P27544 350 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 CTGFP29279 349 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 ARHGAP25P42331 645 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 SUMO3P55854 103 aaPredicted RBP4.51□□□□□ -1.69
MDM2-227ENST00000540709 SUPT20HL1Q3ZLR7 823 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 ARHGAP29Q52LW3 1261 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 DCAF12L1Q5VU92 463 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 CACHD1Q5VU97 1274 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 PAPD7Q5XG87 772 aaKnown RBP4.51□□□□□ -1.69
MDM2-227ENST00000540709 FCRL6Q6DN72 434 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 PPP4R4Q6NUP7 873 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 TERB1Q8NA31 727 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 KBTBD7Q8WVZ9 684 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 NAF1Q96HR8 494 aaKnown RBP4.51□□□□□ -1.69
MDM2-227ENST00000540709 LENG8Q96PV6 779 aaPredicted RBP4.51□□□□□ -1.69
MDM2-227ENST00000540709 ASB2Q96Q27 587 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 CAMKK2Q96RR4 588 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 C17orf80Q9BSJ5 609 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 CIPCQ9C0C6 399 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 BHMT2Q9H2M3 363 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 TFCP2L1Q9NZI6 479 aa4.51□□□□□ -1.69
MDM2-227ENST00000540709 ZNF70Q9UC06 446 aaPredicted RBP4.51□□□□□ -1.69
MDM2-227ENST00000540709 USP19O94966 1318 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 CAPN8A6NHC0 703 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 KCNU1A8MYU2 1149 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 ERC2O15083 957 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 PRPF3O43395 683 aaKnown RBP4.5□□□□□ -1.69
MDM2-227ENST00000540709 TUSC2O75896 110 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 BRAFP15056 766 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 PRKAR1BP31321 381 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 WNT3P56703 355 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 LRRC41Q15345 812 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 ETFDHQ16134 617 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 OVCH2Q7RTZ1 564 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 CHPFQ8IZ52 775 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 DNAJB14Q8TBM8 379 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 SCARB1Q8WTV0 552 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 SOCS4Q8WXH5 440 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 STK31Q9BXU1 1019 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 PDGFCQ9NRA1 345 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 CPNE7Q9UBL6 633 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 LPAR3Q9UBY5 353 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 HDAC9Q9UKV0 1011 aa4.5□□□□□ -1.69
MDM2-227ENST00000540709 ZNF804BA4D1E1 1349 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 SRGAP2O75044 1071 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 PRKCBP05771 671 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 MTHFSP49914 203 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 ARFIP2P53365 341 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 KLF9Q13886 244 aaPredicted RBP4.49□□□□□ -1.69
MDM2-227ENST00000540709 CERKLQ49MI3 558 aaPredicted RBP4.49□□□□□ -1.69
MDM2-227ENST00000540709 ZNF425Q6IV72 752 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 KIRREL2Q6UWL6 708 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 ZDHHC24Q6UX98 284 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 MAEAQ7L5Y9 396 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 NEK8Q86SG6 692 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 SIRT6Q8N6T7 355 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 IL31RAQ8NI17 732 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 DENND1AQ8TEH3 1009 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 ANKS1AQ92625 1134 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 RPL36ALQ969Q0 106 aaKnown RBP4.49□□□□□ -1.69
MDM2-227ENST00000540709 PRR25Q96S07 402 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 ZNF518BQ9C0D4 1074 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 ATP6V0A4Q9HBG4 840 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 A1CFQ9NQ94 594 aaKnown RBP4.49□□□□□ -1.69
MDM2-227ENST00000540709 USP22Q9UPT9 525 aa4.49□□□□□ -1.69
MDM2-227ENST00000540709 THRAP3Q9Y2W1 955 aaKnown RBP4.49□□□□□ -1.69
MDM2-227ENST00000540709 TBX3O15119 743 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 GCATO75600 419 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 RFPL1O75677 317 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 S100BP04271 92 aaPredicted RBP4.48□□□□□ -1.69
MDM2-227ENST00000540709 TUBB4AP04350 444 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 MMP13P45452 471 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 AGFG1P52594 562 aaKnown RBP4.48□□□□□ -1.69
MDM2-227ENST00000540709 CCNIQ14094 377 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 PPP2R5AQ15172 486 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 CNN3Q15417 329 aaKnown RBP4.48□□□□□ -1.69
MDM2-227ENST00000540709 CYP1B1Q16678 543 aa4.48□□□□□ -1.69
MDM2-227ENST00000540709 MINDY4Q4G0A6 757 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms