RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 SNX25Q9H3E2 840 aa20.55■□□□□ 0.88
SOD2-212ENST00000540491 CRTAC1Q9NQ79 661 aa20.55■□□□□ 0.88
SOD2-212ENST00000540491 WNT6Q9Y6F9 365 aa20.55■□□□□ 0.88
SOD2-212ENST00000540491 SDK1Q7Z5N4 2213 aa20.55■□□□□ 0.88
SOD2-212ENST00000540491 ZNF638Q14966 1978 aaKnown RBP20.55■□□□□ 0.88
SOD2-212ENST00000540491 C2orf78A6NCI8 922 aa20.54■□□□□ 0.88
SOD2-212ENST00000540491 GDF9O60383 454 aa20.54■□□□□ 0.88
SOD2-212ENST00000540491 YEATS4O95619 227 aa20.54■□□□□ 0.88
SOD2-212ENST00000540491 ATICP31939 592 aa20.54■□□□□ 0.88
SOD2-212ENST00000540491 PXNP49023 591 aaPredicted RBP20.54■□□□□ 0.88
SOD2-212ENST00000540491 CYP27A1Q02318 531 aa20.54■□□□□ 0.88
SOD2-212ENST00000540491 PLK5Q496M5 336 aa20.54■□□□□ 0.88
SOD2-212ENST00000540491 FAM26FQ5R3K3 315 aa20.54■□□□□ 0.88
SOD2-212ENST00000540491 LMBRD2Q68DH5 695 aaPredicted RBP20.54■□□□□ 0.88
SOD2-212ENST00000540491 DDX42Q86XP3 938 aaKnown RBP eCLIP20.54■□□□□ 0.88
SOD2-212ENST00000540491 XXYLT1Q8NBI6 393 aa20.54■□□□□ 0.88
SOD2-212ENST00000540491 PCED1BQ96HM7 432 aa20.54■□□□□ 0.88
SOD2-212ENST00000540491 SLITRK1Q96PX8 696 aa20.54■□□□□ 0.88
SOD2-212ENST00000540491 C7orf25Q9BPX7 421 aa20.54■□□□□ 0.88
SOD2-212ENST00000540491 ELOVL4Q9GZR5 314 aa20.54■□□□□ 0.88
SOD2-212ENST00000540491 AGPAT3Q9NRZ7 376 aa20.54■□□□□ 0.88
SOD2-212ENST00000540491 SPAG17Q6Q759 2223 aa20.54■□□□□ 0.88
SOD2-212ENST00000540491 CNOT1A5YKK6 2376 aaKnown RBP20.53■□□□□ 0.88
SOD2-212ENST00000540491 EPG5Q9HCE0 2579 aa20.53■□□□□ 0.88
SOD2-212ENST00000540491 ZNF840PA6NDX5 716 aa20.53■□□□□ 0.88
SOD2-212ENST00000540491 CUTAO60888 179 aa20.53■□□□□ 0.88
SOD2-212ENST00000540491 ATP2C2O75185 946 aa20.53■□□□□ 0.88
SOD2-212ENST00000540491 PDGFRBP09619 1106 aa20.53■□□□□ 0.88
SOD2-212ENST00000540491 EIF2DP41214 584 aaKnown RBP20.53■□□□□ 0.88
SOD2-212ENST00000540491 PSMC1P62191 440 aaKnown RBP20.53■□□□□ 0.88
SOD2-212ENST00000540491 TNNC1P63316 161 aa20.53■□□□□ 0.88
SOD2-212ENST00000540491 ASIC1P78348 528 aa20.53■□□□□ 0.88
SOD2-212ENST00000540491 HSF5Q4G112 596 aaPredicted RBP20.53■□□□□ 0.88
SOD2-212ENST00000540491 TDRD10Q5VZ19 366 aaKnown RBP20.53■□□□□ 0.88
SOD2-212ENST00000540491 SCARA3Q6AZY7 606 aa20.53■□□□□ 0.88
SOD2-212ENST00000540491 C12orf56Q8IXR9 622 aa20.53■□□□□ 0.88
SOD2-212ENST00000540491 CGRRF1Q99675 332 aa20.53■□□□□ 0.88
SOD2-212ENST00000540491 PTPRJQ12913 1337 aa20.53■□□□□ 0.88
SOD2-212ENST00000540491 K7ELQ4 463 aaPredicted RBP20.52■□□□□ 0.88
SOD2-212ENST00000540491 LEFTY2O00292 366 aa20.52■□□□□ 0.88
SOD2-212ENST00000540491 TM4SF5O14894 197 aa20.52■□□□□ 0.88
SOD2-212ENST00000540491 HCRTO43612 131 aa20.52■□□□□ 0.88
SOD2-212ENST00000540491 OLFM2O95897 454 aa20.52■□□□□ 0.88
SOD2-212ENST00000540491 DLATP10515 647 aaKnown RBP20.52■□□□□ 0.88
SOD2-212ENST00000540491 HOXD13P35453 343 aa20.52■□□□□ 0.88
SOD2-212ENST00000540491 MPLP40238 635 aa20.52■□□□□ 0.88
SOD2-212ENST00000540491 AP3M2P53677 418 aa20.52■□□□□ 0.88
SOD2-212ENST00000540491 MRPS21P82921 87 aaKnown RBP20.52■□□□□ 0.88
SOD2-212ENST00000540491 PSMD2Q13200 908 aa20.52■□□□□ 0.88
SOD2-212ENST00000540491 WDR72Q3MJ13 1102 aa20.52■□□□□ 0.88
SOD2-212ENST00000540491 USP39Q53GS9 565 aaKnown RBP20.52■□□□□ 0.88
SOD2-212ENST00000540491 UNC13DQ70J99 1090 aa20.52■□□□□ 0.88
SOD2-212ENST00000540491 PDZD8Q8NEN9 1154 aa20.52■□□□□ 0.88
SOD2-212ENST00000540491 OR6B3Q8NGW1 331 aa20.52■□□□□ 0.88
SOD2-212ENST00000540491 OVCA2Q8WZ82 227 aa20.52■□□□□ 0.88
SOD2-212ENST00000540491 SYAP1Q96A49 352 aaPredicted RBP20.52■□□□□ 0.88
SOD2-212ENST00000540491 HHIPQ96QV1 700 aa20.52■□□□□ 0.88
SOD2-212ENST00000540491 PVALEFA0A1B0GWK0 134 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 TGFB1I1O43294 461 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 CST3P01034 146 aaPredicted RBP20.51■□□□□ 0.87
SOD2-212ENST00000540491 PTPN1P18031 435 aaKnown RBP20.51■□□□□ 0.87
SOD2-212ENST00000540491 CYP24A1Q07973 514 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 TRPC3Q13507 836 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 SF3A2Q15428 464 aaKnown RBP20.51■□□□□ 0.87
SOD2-212ENST00000540491 CCDC142Q17RM4 750 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 ADGRG2Q8IZP9 1017 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 TTC16Q8NEE8 873 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 TSTD1Q8NFU3 115 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 GOLGA5Q8TBA6 731 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 USP33Q8TEY7 942 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 DHX58Q96C10 678 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 FAM84AQ96KN4 292 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 DUSP15Q9H1R2 295 aaPredicted RBP20.51■□□□□ 0.87
SOD2-212ENST00000540491 LINC00597Q9H2U6 94 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 VRTNQ9H8Y1 702 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 TBC1D14Q9P2M4 693 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 OBSL1O75147 1896 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 GREB1Q4ZG55 1949 aa20.51■□□□□ 0.87
SOD2-212ENST00000540491 F8VP50 259 aa20.5■□□□□ 0.87
SOD2-212ENST00000540491 RTN3O95197 1032 aaPredicted RBP20.5■□□□□ 0.87
SOD2-212ENST00000540491 HOXC13P31276 330 aa20.5■□□□□ 0.87
SOD2-212ENST00000540491 DGKEP52429 567 aa20.5■□□□□ 0.87
SOD2-212ENST00000540491 EHHADHQ08426 723 aa20.5■□□□□ 0.87
SOD2-212ENST00000540491 BMT2Q1RMZ1 405 aa20.5■□□□□ 0.87
SOD2-212ENST00000540491 PREPLQ4J6C6 727 aaPredicted RBP20.5■□□□□ 0.87
SOD2-212ENST00000540491 MDH1BQ5I0G3 518 aa20.5■□□□□ 0.87
SOD2-212ENST00000540491 STPG1Q5TH74 334 aa20.5■□□□□ 0.87
SOD2-212ENST00000540491 RDH13Q8NBN7 331 aa20.5■□□□□ 0.87
SOD2-212ENST00000540491 GLIS3Q8NEA6 775 aa20.5■□□□□ 0.87
SOD2-212ENST00000540491 EZH1Q92800 747 aaPredicted RBP20.5■□□□□ 0.87
SOD2-212ENST00000540491 OTUB2Q96DC9 234 aa20.5■□□□□ 0.87
SOD2-212ENST00000540491 DUSP9Q99956 384 aaKnown RBP20.5■□□□□ 0.87
SOD2-212ENST00000540491 ATP8B3O60423 1300 aa20.5■□□□□ 0.87
SOD2-212ENST00000540491 A8MXQ7 604 aa20.49■□□□□ 0.87
SOD2-212ENST00000540491 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.49■□□□□ 0.87
SOD2-212ENST00000540491 ALDH1A2O94788 518 aa20.49■□□□□ 0.87
SOD2-212ENST00000540491 OAS1P00973 400 aaKnown RBP20.49■□□□□ 0.87
SOD2-212ENST00000540491 OPRD1P41143 372 aa20.49■□□□□ 0.87
SOD2-212ENST00000540491 USP46P62068 366 aa20.49■□□□□ 0.87
SOD2-212ENST00000540491 ATL3Q6DD88 541 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms