RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 USP4Q13107 963 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 TRPC3Q13507 836 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 PON2Q15165 354 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 ZACNQ401N2 412 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 SCN4BQ8IWT1 228 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 B3GALNT2Q8NCR0 500 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 OSCP1Q8WVF1 389 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 CHAMP1Q96JM3 812 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 CYP2S1Q96SQ9 504 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 ELOVL4Q9GZR5 314 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 DPEP3Q9H4B8 488 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 RBM12Q9NTZ6 932 aaKnown RBP13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 TMEM30AQ9NV96 361 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 IL37Q9NZH6 218 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 ARHGAP26Q9UNA1 814 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 C2orf78A6NCI8 922 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 ZNF840PA6NDX5 716 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 NR3C1P04150 777 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 HDCP19113 662 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 TGM1P22735 817 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 CNR2P34972 360 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 CACNA2D1P54289 1103 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 DLG4P78352 724 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 SLC7A9P82251 487 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 ZXDBP98169 803 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 FOXK2Q01167 660 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 AMPD2Q01433 879 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 CYP27A1Q02318 531 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 NCOA4Q13772 614 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 KCNB1Q14721 858 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 MTF1Q14872 753 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 MDH1BQ5I0G3 518 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 C1orf220Q5T0J3 134 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 TRIM68Q6AZZ1 485 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 FSTL4Q6MZW2 842 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 Q6ZS52 159 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 PAQR9Q6ZVX9 377 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 GPR161Q8N6U8 529 aaKnown RBP13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 OR6B3Q8NGW1 331 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 TTC8Q8TAM2 541 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 TAF4BQ92750 862 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 B3GNT5Q9BYG0 378 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 EBF3Q9H4W6 596 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 ATP6V1DQ9Y5K8 247 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 RALGAPA1Q6GYQ0 2036 aa13.97□□□□□ -0.17
SEMA4D-223ENST00000540475 MYOFQ9NZM1 2061 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 FAM92AA1XBS5 289 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 A8MXQ7 604 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 CHURC1-FNTBB4DL54 471 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 F8VP50 259 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 KIF20AO95235 890 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 CKMP06732 381 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 ARSAP15289 507 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 ANXA13P27216 316 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 GJA4P35212 333 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 ID4P47928 161 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 CDH8P55286 799 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 SGSM1Q2NKQ1 1148 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 EML3Q32P44 896 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 SNX30Q5VWJ9 437 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 CC2D1AQ6P1N0 951 aaPredicted RBP13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 KRBA2Q6ZNG9 492 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 ERMP1Q7Z2K6 904 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 GUF1Q8N442 669 aaKnown RBP13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 DCLK2Q8N568 766 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 ARL14EPQ8N8R7 260 aaPredicted RBP13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 SDCBP2Q9H190 292 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 ECT2Q9H8V3 914 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 FBRSL1Q9HCM7 1045 aaKnown RBP13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 C2orf42Q9NWW7 574 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 TRPM5Q9NZQ8 1165 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 NXF1Q9UBU9 619 aaKnown RBP13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 SMG5Q9UPR3 1016 aaKnown RBP13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 GTF3C3Q9Y5Q9 886 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 CEP250Q9BV73 2442 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 SPAG17Q6Q759 2223 aa13.96□□□□□ -0.17
SEMA4D-223ENST00000540475 CCDC163A0A0D9SF12 145 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 TNFRSF10BO14763 440 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 CALUO43852 315 aaPredicted RBP13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 PHACTR2O75167 634 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 ASS1P00966 412 aaKnown RBP13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 OAS1P00973 400 aaKnown RBP13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 DRD1P21728 446 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 GALK1P51570 392 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 ZNF699Q32M78 642 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 ZNF667Q5HYK9 610 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 SV2AQ7L0J3 742 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 LONP2Q86WA8 852 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 NUP93Q8N1F7 819 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 CRYBG2Q8N1P7 616 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 SH3RF2Q8TEC5 729 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 OVCA2Q8WZ82 227 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 DUSP9Q99956 384 aaKnown RBP13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 ZNF518BQ9C0D4 1074 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 RNF38Q9H0F5 515 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 SMYD3Q9H7B4 428 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 COMMD8Q9NX08 183 aa13.95□□□□□ -0.18
SEMA4D-223ENST00000540475 DUS2Q9NX74 493 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms