RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 LRRC6Q86X45 466 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 CCDC89Q8N998 374 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 SEPT8Q92599 483 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 FLRT1Q9NZU1 646 aa9.08□□□□□ -0.96
DDB1-217ENST00000540166 TLL1O43897 1013 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 ASLP04424 464 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 LSAMPQ13449 338 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 IKBKEQ14164 716 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 HP1BP3Q5SSJ5 553 aaPredicted RBP9.07□□□□□ -0.96
DDB1-217ENST00000540166 FRMD5Q7Z6J6 570 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 SCUBE1Q8IWY4 988 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 TTC17Q96AE7 1141 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 CCDC124Q96CT7 223 aaKnown RBP9.07□□□□□ -0.96
DDB1-217ENST00000540166 HES6Q96HZ4 224 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 RANBP17Q9H2T7 1088 aaKnown RBP9.07□□□□□ -0.96
DDB1-217ENST00000540166 PFDN4Q9NQP4 134 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 PDGFCQ9NRA1 345 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 ZDHHC18Q9NUE0 388 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 MTO1Q9Y2Z2 717 aaKnown RBP9.07□□□□□ -0.96
DDB1-217ENST00000540166 SCINQ9Y6U3 715 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 UMODL1Q5DID0 1318 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 C17orf102A2RUQ5 167 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 GSC2O15499 205 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 MAP3K13O43283 966 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 NOL3O60936 208 aaKnown RBP9.07□□□□□ -0.96
DDB1-217ENST00000540166 CNMDO75829 334 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 NOL4O94818 638 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 PON1P27169 355 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 ITGA8P53708 1063 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 MTTPP55157 894 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 KRT81Q14533 505 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 TRMT5Q32P41 509 aaKnown RBP9.07□□□□□ -0.96
DDB1-217ENST00000540166 DNAL1Q4LDG9 190 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 SLC30A10Q6XR72 485 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 FAM178BQ8IXR5 827 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 LRRC57Q8N9N7 239 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 PPP1R14BQ96C90 147 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 MTMR9Q96QG7 549 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 TRAIPQ9BWF2 469 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 TSSK1BQ9BXA7 367 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 ANO3Q9BYT9 981 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 ARHGEF38Q9NXL2 777 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 ZNF180Q9UJW8 692 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 CEP350Q5VT06 3117 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 CYP11B2P19099 503 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 PHBP35232 272 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 HIC1Q14526 733 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 EDRF1Q3B7T1 1238 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 RBM44Q6ZP01 1051 aaKnown RBP9.07□□□□□ -0.96
DDB1-217ENST00000540166 UTP4Q969X6 686 aaKnown RBP9.07□□□□□ -0.96
DDB1-217ENST00000540166 ERVK-5Q9HDB9 667 aa9.07□□□□□ -0.96
DDB1-217ENST00000540166 ESYT2A0FGR8 921 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 STAMBPO95630 424 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 IFNB1P01574 187 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 ANPEPP15144 967 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 RFC1P35251 1148 aaPredicted RBP9.06□□□□□ -0.96
DDB1-217ENST00000540166 CASP4P49662 377 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 PDE1BQ01064 536 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 ITGA9Q13797 1035 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 KCTD21Q4G0X4 260 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 ZC2HC1CQ53FD0 456 aaPredicted RBP9.06□□□□□ -0.96
DDB1-217ENST00000540166 VSTM1Q6UX27 236 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 PATL1Q86TB9 770 aaKnown RBP9.06□□□□□ -0.96
DDB1-217ENST00000540166 CASP10Q92851 521 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 TTC25Q96NG3 672 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 CADM1Q9BY67 442 aaKnown RBP9.06□□□□□ -0.96
DDB1-217ENST00000540166 FGFBP2Q9BYJ0 223 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 TBC1D23Q9NUY8 699 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 M0R2N6 131 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 OAS1P00973 400 aaKnown RBP9.06□□□□□ -0.96
DDB1-217ENST00000540166 ESRRGP62508 458 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 GPC5P78333 572 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 MTMR1Q13613 665 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 CNGA3Q16281 694 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 SLC35G1Q2M3R5 365 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 CLNKQ7Z7G1 428 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 SLC25A41Q8N5S1 370 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 SYTL5Q8TDW5 730 aaPredicted RBP9.06□□□□□ -0.96
DDB1-217ENST00000540166 TIFAQ96CG3 184 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 DNAJC19Q96DA6 116 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 REEP2Q9BRK0 252 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 YIPF2Q9BWQ6 316 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 WNT8AQ9H1J5 351 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 NRBP2Q9NSY0 501 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 WASF2Q9Y6W5 498 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 PLA2G6O60733 806 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 FTLP02792 175 aaPredicted RBP9.06□□□□□ -0.96
DDB1-217ENST00000540166 MT-ND3P03897 115 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 AMHP03971 560 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 TRIM49P0CI25 452 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 TRIM49CP0CI26 452 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 PCYT1AP49585 367 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 NEK3P51956 506 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 LY6KQ17RY6 165 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 AAK1Q2M2I8 961 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 ZNF746Q6NUN9 644 aaPredicted RBP9.06□□□□□ -0.96
DDB1-217ENST00000540166 SLC13A5Q86YT5 568 aaPredicted RBP9.06□□□□□ -0.96
DDB1-217ENST00000540166 ATL2Q8NHH9 583 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 SPOCK2Q92563 424 aa9.06□□□□□ -0.96
DDB1-217ENST00000540166 LRGUKQ96M69 825 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms