RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 EPHB6O15197 1021 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 BEST1O76090 585 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 NOL4O94818 638 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 PAEPP09466 180 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 UCHL3P15374 230 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 HMGA1P17096 107 aaKnown RBP7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 PTPN2P17706 415 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 RFX1P22670 979 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 ADORA2BP29275 332 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 CCR2P41597 374 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 KLK7P49862 253 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 MFAP3P55082 362 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 RPL10AP62906 217 aaKnown RBP7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 TPM4P67936 248 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 UBXN1Q04323 297 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 ZP2Q05996 745 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 VEPH1Q14D04 833 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 SYCP1Q15431 976 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 DDR2Q16832 855 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 PPP1R26Q5T8A7 1209 aaPredicted RBP7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 KLHDC7AQ5VTJ3 777 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 SDHAF4Q5VUM1 108 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 ARHGAP17Q68EM7 881 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 SMYD5Q6GMV2 418 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 IQCEQ6IPM2 695 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 CLEC20AQ6ZU45 233 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 ITIH5Q86UX2 942 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 SCN4BQ8IWT1 228 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 ADHFE1Q8IWW8 467 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 LEMD2Q8NC56 503 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 ZMIZ2Q8NF64 920 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 GPR152Q8TDT2 470 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 GIPC2Q8TF65 315 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 CYFIP2Q96F07 1278 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 TRMT2BQ96GJ1 504 aaKnown RBP7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 SPATA17Q96L03 361 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 C8orf48Q96LL4 319 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 CEP295NLQ96MC4 621 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 ZNF512Q96ME7 567 aaPredicted RBP7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 SMOQ99835 787 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 CORO1BQ9BR76 489 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 MED10Q9BTT4 135 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 LSM14BQ9BX40 385 aaKnown RBP7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 NAA15Q9BXJ9 866 aaKnown RBP7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 GPR88Q9GZN0 384 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 DNAI2Q9GZS0 605 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 ZNF334Q9HCZ1 680 aaPredicted RBP7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 DMAP1Q9NPF5 467 aaPredicted RBP7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 ASAH2Q9NR71 780 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 DNAJC12Q9UKB3 198 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 PCDHB4Q9Y5E5 795 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 FHOD1Q9Y613 1164 aa7.4□□□□□ -1.22
LPCAT3-209ENST00000540060 TICRRQ7Z2Z1 1910 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 SLC38A8A6NNN8 435 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 C2CD4DB7Z1M9 353 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 LOC730098B7Z3J9 87 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 O00370 1275 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 ARHGAP33O14559 1287 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 TNFRSF10BO14763 440 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 TEX33O43247 280 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 MOSPD3O75425 235 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 TADA3O75528 432 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 AP1G2O75843 785 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 CALCAP01258 141 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 FAM200BP0CF97 657 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 PNMA6AP0CW24 399 aaPredicted RBP7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 CSH1P0DML2 217 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 CSH2P0DML3 217 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 VDRP11473 427 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 KRT5P13647 590 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 CD19P15391 556 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 NPR3P17342 541 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 CEBPBP17676 345 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 SP100P23497 879 aaPredicted RBP7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 FSHRP23945 695 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 BRD2P25440 801 aaKnown RBP7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 ANXA13P27216 316 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 GRIK1P39086 918 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 JAM2P57087 298 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 FANCCQ00597 558 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 MTMR3Q13615 1198 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 RAPGEF1Q13905 1077 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 ARHGAP44Q17R89 818 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 GOLGA7BQ2TAP0 167 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 SGO2Q562F6 1265 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 LCE2AQ5TA79 106 aaPredicted RBP7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 DENND5BQ6ZUT9 1274 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 GAREM2Q75VX8 874 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 PDZD4Q76G19 769 aaPredicted RBP7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 GET4Q7L5D6 327 aaPredicted RBP7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 DNAJB7Q7Z6W7 309 aaPredicted RBP7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 TMEM150AQ86TG1 271 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 TTC30AQ86WT1 665 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 NPAS3Q8IXF0 933 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 ITFG1Q8TB96 612 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 SHKBP1Q8TBC3 707 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 ADAMTS19Q8TE59 1207 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 TFAP2BQ92481 460 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 TCEAL4Q96EI5 215 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 MYRFLQ96LU7 910 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms