RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 HTRA2O43464 458 aaPredicted RBP6.69□□□□□ -1.34
MRE11-209ENST00000540013 NRP2O60462 931 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 OPHN1O60890 802 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 CNR2P34972 360 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 PPP2CBP62714 309 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 VAMP2P63027 116 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 PPP2CAP67775 309 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 CDC16Q13042 620 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 MAPK7Q13164 816 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 PPP2R5CQ13362 524 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 KRT32Q14532 448 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 NUGGCQ68CJ6 796 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 MOGAT3Q86VF5 341 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 ERC1Q8IUD2 1116 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 CDYL2Q8N8U2 506 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 MSANTD4Q8NCY6 345 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 ATP2A3Q93084 1043 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 RRP36Q96EU6 259 aaKnown RBP6.69□□□□□ -1.34
MRE11-209ENST00000540013 DYDC2Q96IM9 177 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 RAX2Q96IS3 184 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 TXLNGYQ9BZA5 131 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 OR10A2Q9H208 303 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 GHITMQ9H3K2 345 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 SEC61A2Q9H9S3 476 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 PREBQ9HCU5 417 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 CDC42EP3Q9UKI2 254 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 OGDHLQ9ULD0 1010 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 SLC39A10Q9ULF5 831 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 EDARQ9UNE0 448 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 LIMCH1Q9UPQ0 1083 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 NR2E3Q9Y5X4 410 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 NUMBLQ9Y6R0 609 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 SLIT3O75094 1523 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 MYPNQ86TC9 1320 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 RGPD5Q99666 1765 aa6.69□□□□□ -1.34
MRE11-209ENST00000540013 BLMP54132 1417 aaPredicted RBP6.68□□□□□ -1.34
MRE11-209ENST00000540013 SSH2Q76I76 1423 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 ISM1B1AKI9 464 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 LAMTOR5O43504 91 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 HTATSF1O43719 755 aaKnown RBP6.68□□□□□ -1.34
MRE11-209ENST00000540013 DOK2O60496 412 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 B4GALT4O60513 344 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 URI1O94763 535 aaPredicted RBP6.68□□□□□ -1.34
MRE11-209ENST00000540013 STARD3NLO95772 234 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 GCP02774 474 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 ALOX15P16050 662 aaPredicted RBP6.68□□□□□ -1.34
MRE11-209ENST00000540013 HOXA5P20719 270 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 EDNRBP24530 442 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 MANFP55145 182 aaKnown RBP6.68□□□□□ -1.34
MRE11-209ENST00000540013 NFIXQ14938 502 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 MUM1Q2TAK8 710 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 ADCK5Q3MIX3 580 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 CT83Q5H943 113 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 AGBL4Q5VU57 503 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 TANGO2Q6ICL3 276 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 KRT27Q7Z3Y8 459 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 OR8H1Q8NGG4 311 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 PLBD2Q8NHP8 589 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 TDRD7Q8NHU6 1098 aaKnown RBP6.68□□□□□ -1.34
MRE11-209ENST00000540013 IL31RAQ8NI17 732 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 AUTS2Q8WXX7 1259 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 MUL1Q969V5 352 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 EAF2Q96CJ1 260 aaPredicted RBP6.68□□□□□ -1.34
MRE11-209ENST00000540013 MSLNLQ96KJ4 702 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 WDR92Q96MX6 357 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 SLF1Q9BQI6 1058 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 NOL10Q9BSC4 688 aaKnown RBP6.68□□□□□ -1.34
MRE11-209ENST00000540013 SENP6Q9GZR1 1112 aaPredicted RBP6.68□□□□□ -1.34
MRE11-209ENST00000540013 HAPLN2Q9GZV7 340 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 ZWILCHQ9H900 591 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 ZMAT3Q9HA38 289 aaKnown RBP6.68□□□□□ -1.34
MRE11-209ENST00000540013 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.68□□□□□ -1.34
MRE11-209ENST00000540013 ABCF3Q9NUQ8 709 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 KIF17Q9P2E2 1029 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 TBC1D29Q9UFV1 150 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 VPS28Q9UK41 221 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 RRP7AQ9Y3A4 280 aaKnown RBP6.68□□□□□ -1.34
MRE11-209ENST00000540013 PCDHB6Q9Y5E3 794 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 SPATA31A1Q5TZJ5 1347 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 CAMTA1Q9Y6Y1 1673 aa6.68□□□□□ -1.34
MRE11-209ENST00000540013 COL18A1P39060 1754 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 PI4KAP2A4QPH2 592 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 ELL2O00472 640 aaPredicted RBP6.67□□□□□ -1.34
MRE11-209ENST00000540013 TRIM38O00635 465 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 HNRNPDLO14979 420 aaKnown RBP6.67□□□□□ -1.34
MRE11-209ENST00000540013 SGPL1O95470 568 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 PLATP00750 562 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 APOA4P06727 396 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 ZNF888P0CJ79 500 aaPredicted RBP6.67□□□□□ -1.34
MRE11-209ENST00000540013 ATP6V1B1P15313 513 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 MRE11P49959 708 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 MAP2K6P52564 334 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 EPHB4P54760 987 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 RRADP55042 308 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 NRG3P56975 720 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 RAC3P60763 192 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 CREMQ03060 361 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 CUL4AQ13619 759 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 NFYCQ13952 458 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 SCARB2Q14108 478 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms