RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 KBTBD13C9JR72 458 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 PAPSS1O43252 624 aaPredicted RBP23.6■■□□□ 1.37
HOMER3-204ENST00000539827 PTPN1P18031 435 aaKnown RBP23.6■■□□□ 1.37
HOMER3-204ENST00000539827 FLT3P36888 993 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 SLC6A3Q01959 620 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 ADCY2Q08462 1091 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 HADHQ16836 314 aaKnown RBP23.6■■□□□ 1.37
HOMER3-204ENST00000539827 SH3PXD2AQ5TCZ1 1133 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 OLFML1Q6UWY5 402 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 RTN4RL1Q86UN2 441 aaPredicted RBP23.6■■□□□ 1.37
HOMER3-204ENST00000539827 EIF1ADQ8N9N8 165 aaKnown RBP23.6■■□□□ 1.37
HOMER3-204ENST00000539827 RUNDC3BQ96NL0 473 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 UNC93B1Q9H1C4 597 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 ASNSD1Q9NWL6 643 aa23.6■■□□□ 1.37
HOMER3-204ENST00000539827 C2CD4BA6NLJ0 364 aa23.59■■□□□ 1.37
HOMER3-204ENST00000539827 CLDN5O00501 218 aa23.59■■□□□ 1.37
HOMER3-204ENST00000539827 GABRDO14764 452 aa23.59■■□□□ 1.37
HOMER3-204ENST00000539827 LCP1P13796 627 aa23.59■■□□□ 1.37
HOMER3-204ENST00000539827 PDGFRAP16234 1089 aa23.59■■□□□ 1.37
HOMER3-204ENST00000539827 RPL9P32969 192 aaKnown RBP23.59■■□□□ 1.37
HOMER3-204ENST00000539827 ZNF143P52747 638 aaPredicted RBP23.59■■□□□ 1.37
HOMER3-204ENST00000539827 C15orf59Q2T9L4 293 aaPredicted RBP23.59■■□□□ 1.37
HOMER3-204ENST00000539827 RAB6CQ53S08 254 aa23.59■■□□□ 1.37
HOMER3-204ENST00000539827 KCNT1Q5JUK3 1230 aa23.59■■□□□ 1.37
HOMER3-204ENST00000539827 KIAA0319Q5VV43 1072 aa23.59■■□□□ 1.37
HOMER3-204ENST00000539827 STK32AQ8WU08 396 aa23.59■■□□□ 1.37
HOMER3-204ENST00000539827 RAB6CQ9H0N0 254 aa23.59■■□□□ 1.37
HOMER3-204ENST00000539827 SAGE1Q9NXZ1 904 aa23.59■■□□□ 1.37
HOMER3-204ENST00000539827 DDX43Q9NXZ2 648 aaKnown RBP23.59■■□□□ 1.37
HOMER3-204ENST00000539827 DNAH12Q6ZR08 3092 aa23.59■■□□□ 1.37
HOMER3-204ENST00000539827 FAM163BP0C2L3 166 aa23.58■■□□□ 1.37
HOMER3-204ENST00000539827 SKIP12755 728 aa23.58■■□□□ 1.37
HOMER3-204ENST00000539827 MIPP30301 263 aa23.58■■□□□ 1.37
HOMER3-204ENST00000539827 FAM193AP78312 1265 aa23.58■■□□□ 1.37
HOMER3-204ENST00000539827 UPP1Q16831 310 aa23.58■■□□□ 1.37
HOMER3-204ENST00000539827 PAN2Q504Q3 1202 aaKnown RBP23.58■■□□□ 1.37
HOMER3-204ENST00000539827 CLEC4CQ8WTT0 213 aa23.58■■□□□ 1.37
HOMER3-204ENST00000539827 I3L4J1 428 aa23.58■■□□□ 1.36
HOMER3-204ENST00000539827 RNF8O76064 485 aa23.58■■□□□ 1.36
HOMER3-204ENST00000539827 GPS2Q13227 327 aa23.58■■□□□ 1.36
HOMER3-204ENST00000539827 TIGD5Q53EQ6 642 aa23.58■■□□□ 1.36
HOMER3-204ENST00000539827 MDH1BQ5I0G3 518 aa23.58■■□□□ 1.36
HOMER3-204ENST00000539827 POLNQ7Z5Q5 900 aa23.58■■□□□ 1.36
HOMER3-204ENST00000539827 ZNF598Q86UK7 904 aaKnown RBP23.58■■□□□ 1.36
HOMER3-204ENST00000539827 KHSRPQ92945 711 aaKnown RBP eCLIP23.58■■□□□ 1.36
HOMER3-204ENST00000539827 HTTP42858 3142 aa23.57■■□□□ 1.36
HOMER3-204ENST00000539827 ECEL1O95672 775 aa23.57■■□□□ 1.36
HOMER3-204ENST00000539827 TRUB2O95900 331 aaKnown RBP23.57■■□□□ 1.36
HOMER3-204ENST00000539827 KRT7P08729 469 aa23.57■■□□□ 1.36
HOMER3-204ENST00000539827 SNX16P57768 344 aa23.57■■□□□ 1.36
HOMER3-204ENST00000539827 CDO1Q16878 200 aa23.57■■□□□ 1.36
HOMER3-204ENST00000539827 FUKQ8N0W3 1084 aa23.57■■□□□ 1.36
HOMER3-204ENST00000539827 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.57■■□□□ 1.36
HOMER3-204ENST00000539827 HNRNPABQ99729 332 aaKnown RBP23.57■■□□□ 1.36
HOMER3-204ENST00000539827 CNPY3Q9BT09 278 aa23.57■■□□□ 1.36
HOMER3-204ENST00000539827 MED10Q9BTT4 135 aa23.57■■□□□ 1.36
HOMER3-204ENST00000539827 UBN1Q9NPG3 1134 aa23.57■■□□□ 1.36
HOMER3-204ENST00000539827 RGS18Q9NS28 235 aa23.57■■□□□ 1.36
HOMER3-204ENST00000539827 POLR3GO15318 223 aaPredicted RBP23.56■■□□□ 1.36
HOMER3-204ENST00000539827 GRIK3Q13003 919 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 ACAP1Q15027 740 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 CCDC14Q49A88 953 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 LINC01599Q8WXQ3 324 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 CFAP57Q96MR6 1250 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 CRTAC1Q9NQ79 661 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 TDRD15B5MCY1 1934 aaKnown RBP23.56■■□□□ 1.36
HOMER3-204ENST00000539827 hCG_1818297A0A087WSY0 165 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 C3orf70A6NLC5 250 aaPredicted RBP23.56■■□□□ 1.36
HOMER3-204ENST00000539827 CDKN2BP42772 138 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 BRCC3P46736 316 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 RPL21P46778 160 aaKnown RBP23.56■■□□□ 1.36
HOMER3-204ENST00000539827 COPS2P61201 443 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 PPP1R7Q15435 360 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 PAQR9Q6ZVX9 377 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 TMEM86AQ8N2M4 240 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 HASPINQ8TF76 798 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 PEBP4Q96S96 227 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 SYT15Q9BQS2 421 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 USP18Q9UMW8 372 aa23.56■■□□□ 1.36
HOMER3-204ENST00000539827 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.56■■□□□ 1.36
HOMER3-204ENST00000539827 C9IYK1 514 aa23.55■■□□□ 1.36
HOMER3-204ENST00000539827 LHX1P48742 406 aa23.55■■□□□ 1.36
HOMER3-204ENST00000539827 ATP11AP98196 1134 aa23.55■■□□□ 1.36
HOMER3-204ENST00000539827 HSPH1Q92598 858 aa23.55■■□□□ 1.36
HOMER3-204ENST00000539827 CCDC114Q96M63 670 aa23.55■■□□□ 1.36
HOMER3-204ENST00000539827 DUSP16Q9BY84 665 aa23.55■■□□□ 1.36
HOMER3-204ENST00000539827 AGPSO00116 658 aa23.54■■□□□ 1.36
HOMER3-204ENST00000539827 BEST1O76090 585 aa23.54■■□□□ 1.36
HOMER3-204ENST00000539827 B3GAT3O94766 335 aa23.54■■□□□ 1.36
HOMER3-204ENST00000539827 KDELR1P24390 212 aa23.54■■□□□ 1.36
HOMER3-204ENST00000539827 GGCXP38435 758 aa23.54■■□□□ 1.36
HOMER3-204ENST00000539827 KRT17Q04695 432 aa23.54■■□□□ 1.36
HOMER3-204ENST00000539827 TUSC3Q13454 348 aa23.54■■□□□ 1.36
HOMER3-204ENST00000539827 CCNG2Q16589 344 aa23.54■■□□□ 1.36
HOMER3-204ENST00000539827 TFDP3Q5H9I0 405 aa23.54■■□□□ 1.36
HOMER3-204ENST00000539827 CD300LGQ6UXG3 332 aa23.54■■□□□ 1.36
HOMER3-204ENST00000539827 GRHL1Q9NZI5 618 aa23.54■■□□□ 1.36
HOMER3-204ENST00000539827 GOLGA6BA6NDN3 693 aa23.54■■□□□ 1.36
HOMER3-204ENST00000539827 DPYSL4O14531 572 aa23.54■■□□□ 1.36
HOMER3-204ENST00000539827 XPO1O14980 1071 aaKnown RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms